Gene Snas_2979 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_2979 
Symbol 
ID8884178 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp3147691 
End bp3148692 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content65% 
IMG OID 
Productglyceraldehyde-3-phosphate dehydrogenase type I 
Protein accessionYP_003511746 
Protein GI291300468 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.175996 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0341327 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCATTC GCGTAGGCAT CAACGGCTTC GGCCGCATCG GTCGCAACTT CTACCGGGCA 
GTTCTCCAGT CGGGTGCCGA CATCGAGCTG GTGGCCTTCA ACGACCTCGG CGACGCCGCC
ACCACCGCGC AGCTGCTGAA GTACGACAGC ATCCTGGGAC GGCTTCCCTA CGAGGTCAAG
GCCAACGACG GTGAGATCAC CGTCAACGGC AAGTCCATCA AGGTGTTCGC CGAGAAGGAC
CCGGCCAAGC TGCCGTGGGG TGACGTCGGC GCCGACGTGG TCATCGAGTC CACCGGTTTC
TTCACCGACG CCACCAAGGC CAAGGCACAC GCCGACAACG GCGCCAAGAA GGTCATCATC
TCGGCTCCGG CCAAGAACGA GGACATCACG ATCGTCTACG GCGTCAACCA CACCGACTAC
GACCCGGCCA AGCACACGGT GATCTCCAAC GCCTCGTGCA CCACCAACTG CCTGGCCCCG
ATGGCCAAGG TCCTGCACGA GAACTTCGGC ATCGAGCGTG GTCTCATGAC CACCATCCAC
GCCTACACCC AGGACCAGAA CCTCCAGGAC GGGCCGCACA AGGACCTGCG CCGCGCCCGC
GCCGCCGCCA TCAACGTCGT CCCGGCGTCG ACCGGCGCCG CCAAGGCCAT CAGCCTGGTC
ATGCCGGAGC TGAAGGGCAA ACTGGACGGT TTCGCGATGC GGGTGCCGAT CCCGACCGGC
TCGGCCACCG ACCTGACCTT CACCGCGTCG CGCGAGACCA CGGTCGAAGA GGTCAACGCC
GCCATCAAGG CCGCCGCCGA GGGCCCGATG AAGGGCGTCC TGTCCTACAC CGAGGACCCG
ATCGTGTCGT CCGACATCGT CACCGACCCG GCCAGCTGCA TCTTCGACGC GGGCCTGACC
AAGGTGATCG GCGACCAGGT CAAGGTCGTG GGCTGGTACG ACAACGAGTG GGGCTTCTCC
AACCGCCTCA TCGACATGGT CAAGCTCGTC GGCTCGAACT GA
 
Protein sequence
MTIRVGINGF GRIGRNFYRA VLQSGADIEL VAFNDLGDAA TTAQLLKYDS ILGRLPYEVK 
ANDGEITVNG KSIKVFAEKD PAKLPWGDVG ADVVIESTGF FTDATKAKAH ADNGAKKVII
SAPAKNEDIT IVYGVNHTDY DPAKHTVISN ASCTTNCLAP MAKVLHENFG IERGLMTTIH
AYTQDQNLQD GPHKDLRRAR AAAINVVPAS TGAAKAISLV MPELKGKLDG FAMRVPIPTG
SATDLTFTAS RETTVEEVNA AIKAAAEGPM KGVLSYTEDP IVSSDIVTDP ASCIFDAGLT
KVIGDQVKVV GWYDNEWGFS NRLIDMVKLV GSN