Gene Snas_2967 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_2967 
Symbol 
ID8884166 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp3134630 
End bp3135226 
Gene Length597 bp 
Protein Length198 aa 
Translation table11 
GC content67% 
IMG OID 
ProductPeptidoglycan-binding domain 1 protein 
Protein accessionYP_003511735 
Protein GI291300457 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.53526 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.131277 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCAATC TCAAATGGAA AATCGCCGCG ACCGCCAGTG TGGTCGCGTT GGGTGTCGGT 
GGGGCGGTGG GTTTCTCCGG TGTGGCCGCC GCCGAACCGA CCATTCTGAC CTCGACGTCG
TTTGTGGACG GCCTTGACAA GGTCACAGAC GACTTCAACG ACCACGCCAG GGAACTGGGC
GCGCCGCTCA GCGACCACGG CAAGAACTCC TGGGGTACCG ACATCGTCAT CGTGTGGCAG
GCCATCCTGG CCGCCGACGG CTACCTCACC TATGAGGGGG TCGACGGTTA CTTCGGTGCC
AAGACCGCCG CGGCCACCGC CAAGTGGCAG GCCGACCGGG GCATCGACGC CGACAAGCCG
GGCACCGTCG GCCACACGAC CTGGGCGTAC GCGGACAACA ACCTCATCGC CGACGACGGC
ACCGTCGACT ACCGCACCCC CGGCCTGGGT GTCGTGGTCT TCAAGCGGGC GCCGGGTCCT
GACGGCCACT ACACGCTGGT GTCCACCGCC GACGCGGCCG ACGGCTACGG CTGGCGCAAC
CGGGGTGGGG ACCACATCTA CTTCTCCAAG ATGACCCTGC GGTTGGCCTT GGAGTAG
 
Protein sequence
MRNLKWKIAA TASVVALGVG GAVGFSGVAA AEPTILTSTS FVDGLDKVTD DFNDHARELG 
APLSDHGKNS WGTDIVIVWQ AILAADGYLT YEGVDGYFGA KTAAATAKWQ ADRGIDADKP
GTVGHTTWAY ADNNLIADDG TVDYRTPGLG VVVFKRAPGP DGHYTLVSTA DAADGYGWRN
RGGDHIYFSK MTLRLALE