Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_2964 |
Symbol | |
ID | 8884163 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | + |
Start bp | 3128322 |
End bp | 3129752 |
Gene Length | 1431 bp |
Protein Length | 476 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | |
Product | glycosyl transferase family 2 |
Protein accession | YP_003511732 |
Protein GI | 291300454 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0324251 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.00721921 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGACTGACG TCGACACCCG CGAGTTCAGC GCCCGGACCC TGTTCAGCCG GGGCCAGCGG ATCACGCTGA CGGTGATCGC GGCGGCGATC GCGATCCCGT TGGGGCTCAA CCTGACCCTC GGCATCGGGC CCGAGCCACT GTGGTGGGGC CGGATGGCGA TCGCGGCGAC CGTGGTGCTG TACCTGGCGG TCATCGGTTT CAAACTCGCC ATGATCGCCG GTTCGGGCCG CAGCAGCGCG CTGCACTTCG ACCCCGGCAG CCTGACCGTG ATCGCCGACG CCGCCCTGCC GCCCTACACC GTGCTGGTGC CGCTGTACCG GGAGGCGACG GTACTGCCGA CACTCGTGTC ACGACTGTCG GCACTGGACT ATCCGCGCGA CCGGCTACAG ATCCTGCTGC TCATCGAGGC CGACGACGCC GAGACCCTGG ACGCCGCCGT CACCTGCGCC ACCGACCCGC GCTTCGAGAT CGTCGTGATC CCCGACTCGG TGCCCAAGAC CAAACCCAAG GCCTGCAACA TCGGCCTGGC CCGCGCCGTC GGCGAGTTCT GCGTCATCTA CGACGCCGAG GACCGGCCCG ACCCCGACCA GCTGCGCAAG GCGGCGCTGG CGTTTCGGCT GTCGCCGCAG CGGGTGGTGT GCGTGCAGGC CGAACTCCAG TACTGGAACC CCTGGACCAA CTGGCTGACC CGCTGCTTCG CCGCCGAGTA CGCCACCAAC TTCAGCATGA CCCTGCACGG CATGGACCGC TACCGGCTGG CGATCCCGTT GGGCGGCACC TCGAACCACT TCCGCACCGA CGCGCTGCGC GCCCTGGGCG GCTGGGATCC CTACAACGTC ACCGAGGACG CCGACCTGGG CATCAGGATC GCGCGCCGCG GCTGGGACGT GCGCATGATG GTGTCGGTGA CCGAGGAGGA GGCCAACGCC CGGCTCGGCA ACTGGCTGCG GCAGCGGTCC CGCTGGATCA AGGGCTACCT GCAGACCTGG CTGGTCCACT CCCGACGGCC CTACCGGCTG TGGCGCGAGG TGGGCACCCG ACGCAGTCTG GCGGTGCACC TGACCCTCGG CTTCGCGACG GTGACCACAC TGGTCAACCC GGTGATGTGG GCGATGACGA TCCTGTACCT GATCGTGGGT CCGCAACCGC TGGAACCCCT GTTTCCCAAG TACAACCTGT ACGGCGGCGT GATCGCGATG CTGCTGGGCA ACGCCTTGAT GTGCTACACC CTGATGCTGG GCTGCGTCCG ACGTGGACTG TTCGCGGCGG TGCGGGTGAT GCTGACCATC CCGCTGTACT GGGGACTGAT GAGCCTGGCC GCCTACAAGG CGCTGATCCA GTTGCTGCGC CCCAGCAAAC GGCACTACTG GGAACTGACC GAGCACGGTC TGGTCCGTTC CGAAGACACA GTGGAGACCC ACAATGTTTA A
|
Protein sequence | MTDVDTREFS ARTLFSRGQR ITLTVIAAAI AIPLGLNLTL GIGPEPLWWG RMAIAATVVL YLAVIGFKLA MIAGSGRSSA LHFDPGSLTV IADAALPPYT VLVPLYREAT VLPTLVSRLS ALDYPRDRLQ ILLLIEADDA ETLDAAVTCA TDPRFEIVVI PDSVPKTKPK ACNIGLARAV GEFCVIYDAE DRPDPDQLRK AALAFRLSPQ RVVCVQAELQ YWNPWTNWLT RCFAAEYATN FSMTLHGMDR YRLAIPLGGT SNHFRTDALR ALGGWDPYNV TEDADLGIRI ARRGWDVRMM VSVTEEEANA RLGNWLRQRS RWIKGYLQTW LVHSRRPYRL WREVGTRRSL AVHLTLGFAT VTTLVNPVMW AMTILYLIVG PQPLEPLFPK YNLYGGVIAM LLGNALMCYT LMLGCVRRGL FAAVRVMLTI PLYWGLMSLA AYKALIQLLR PSKRHYWELT EHGLVRSEDT VETHNV
|
| |