| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_2954 |
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| Symbol | |
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| ID | 8884153 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stackebrandtia nassauensis DSM 44728 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013947 |
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| Strand | + |
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| Start bp | 3115209 |
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| End bp | 3117956 |
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| Gene Length | 2748 bp |
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| Protein Length | 915 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | |
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| Product | transcriptional regulator, XRE family |
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| Protein accession | YP_003511722 |
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| Protein GI | 291300444 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.00111801 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGGAATCCG AGGAGTCGAA GCGAGACGGC GAGGACTTCG GTGTCCTGCT GCGGACGTAC
CGAGTGCGGC GAACCTGGAC GCAGTCCGAA CTCGCCGGTC ACGCCAAGGT CAGCGTCCGC
ACCATCAGCG GTTTGGAACT CGGCCGCGCC CGGCCCCGGC TGGCCACGGC GCGGATGCTC
GCCGACGCCC TGGGTCTCGA CGGCCCGGAC CGCGACGGGT TTCTGGCGGC GGCGCACGGG
AACCAGCCCG CCGAGCCGAC ACCGGACTCC ACACAGGAAC CGGTCCCGGC GCAGCTGCCC
ACCGACATCG TGGACTTCAC CGGCCGCGCC GAGGAACTGG CCACACTGGA CGACGCGTTG
CCGGGTCTCG GTGGCGGAGC CACGGTCGTG GTACTGACCG GAACCGCGGG AGTGGGCAAG
ACGGCGCTGG CGGTGCGCTG GGCGCATCGG GTGGCCGGGC GTTTCGACGA CGGACAGCTG
TACGTGAACC TGCGCGGCTT CGGCCCCGGC CCGCCGGTGC GGACCATCGA GGTGGTCGCC
GGATTCCTCG CCGCGCTCGG CGTCCCCGCG GCCCGGATCC CGTTCAAGGA GGAACAGGCC
ACCGCGCTGT ACCGGTCACT GATGTCGGGC CGCCGGATGC TGGTGGTGCT CGACAACGCC
GCCGACGCCG ACCAGGTCCG TCCCCTGATG CCCAGCGGCC GCGACAGCCT CGTGCTCGTC
ACCAGCCGCC ACCTGCTCAC CGGCCTGATC GTCAGCCACG GCGCCCAGCA GCTGACCGTG
GCGCCGCTGT CGGCCACCGA CGCCAGCGAC CTGGTCACCG CCATCGTCGG CGCCAGCCGC
ACTGCGGCGA AGCCGGAGGC GGTCACCGCG CTGGCCGACA GCTGCGCGCG ACTGCCGCTG
GCGCTGCGGA TCGCCGCCGC CAACGTGCGC GCCGACCGCT ACCGCGACAT CGGCGACTAC
GTCGACGAAC TGCGGCACGG CGACCGGCTC GCCTCGTTGA GTGTGGACGG CGACCCCACC
GCCTCGGTGC GGGGCACCTT CGACTGGTCC TACGCGCGGC TGTCCGCACC GGTGCAGCGG
TTGTTCCGGC AGCTCGGAAT GGTGCCCGGC CCCGGCATCA GCGCCGAGGC GGCCGCGGCC
CTGGGCGGCA CCGGCTCGGC CGAGGCGAGC CGGGGGCTGC GCGCGCTGGC CGACGCGCAC
CTGCTCGAGG CGCTTCCCGG CCAGCGCTAC ACCTTCCACG ACCTGTTGCG CGCCTACGCC
ACCGAACGCG GCCTGGCCGT CGACAGTCCC GCCGAACGCG AGGCGGCACT GCGCCGACTG
CTCGACTGGT ACCTGCGCAG CGCGACCGCC GCCGTGGAAC TGTTGTTCCC CACGGGATTG
CGGCTACCGC TGCCGGAGTC TCCCGCCGAG GTCGAAGCCG TCGCACCCAC CGACCGGGCC
GAGGCGCTGT CGTGGCTGAC GACCGAGCGC CGCAACCTCG TGGCCGCCGT GACCCACGCC
GCCGACATCG GGATGTACGA GCCCGCCTGG CGGCTCGGCG ACGCTCTCAA CGGCTACTTC
GACCATGCCG GATACCCGGT GGACTGGCTC GCCGTCGGGC TCGCCGCCCG CACCGCGGCC
GAGTCCGACG GCGACCTCGC CGCCCGGTCG GCGGCGGCGA TCAACCTGGC GCACGCGTAC
CACAACGGCG GTGACGTCGA CGCCGCCATC CCACACGGCC TGGACGCGCG ATCACTGGCC
GCGCGGGCCG GATGGACGGC CGGGGAGGCC AGGGCACTCA ACCGGCTCGC CGTCCTGTAC
GCCGACGGCG GTTCACTGGA TCGCGCCGCC GTACTGTTCG CCGAGGCGCT GGAACTGGAC
CGCCGGACCG GCGACCGGGC GGGCGAGGCG AAGCGCCTGA TGAACCTCGG TCTGTGCGCC
ATGCTCAGCG GCCATTTGCC CGACGCGGCC GGGTATCTGC GCGAGGCCCT CGACATGCCC
GGCGCCGCGA CCTGGCGATA CGCCACGGCC CTGCCCAACC TCGGTGTGGT GCAGCGCTTG
ATGGGCGACT TCGACGCGGC CGCCGACACC TTCGGTCAGG CCCTGGCCGC CAGCAACCAG
GACGGAACCG ACCTGCCGTT CAACCACACC GAGTACGCGG AGCTGTGCCT CGACCGGGGC
CGGTTCGACG AAGCCCGCGA GCACGCCGAC GCCGCCGAGA CCATCGCCCG TGACTCCGGT
GAACGGCGCA GCCAGGTGTG GGCGCTCAAG ACCCAGGCGG TGATCGAACT GCGGCAGGGC
TGCCCGGCCG AAGCCGCGGA ACGCTTCGAG CGTCTGCTGG ACATCATCGG TGATCAGGGG
TTCTTCACGC AACGGGTCAT CGCGCTGGTC GGTCTGGCCG ACGCACGACG TCGCCTCGGC
CGCCTCGAGG CCGCCGTCGC CCACGCCGAG GAGGCGCTGG CCCTGTCCCG GGCCAAGGGC
CACCGGATCC ATGAGGGTGA GGCGCTCACC GCGCTGGCCG ACATCCACCT CGACCGGCAC
CGCGCCGCCG ACCCCGCCGC GCTCGACCAG GCCCTGGCCC ACGCCGAACG CGCGCTGGAA
CTGCAACGCC GAACCGGGCA CCGGCTCGGC GAGGCCCGGA CCCTGATCGT CCTGGCGCAC
ATCACCGGCC ATGCCGGACG CGACGAGGAC GCGGCCCGGA TCCGCGACGA GGCCGTCGCC
CTGTGTGACC ACATCGGACT GCCGGAGGCC GAAGCACGGC TCAGCTGA
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| Protein sequence | MESEESKRDG EDFGVLLRTY RVRRTWTQSE LAGHAKVSVR TISGLELGRA RPRLATARML
ADALGLDGPD RDGFLAAAHG NQPAEPTPDS TQEPVPAQLP TDIVDFTGRA EELATLDDAL
PGLGGGATVV VLTGTAGVGK TALAVRWAHR VAGRFDDGQL YVNLRGFGPG PPVRTIEVVA
GFLAALGVPA ARIPFKEEQA TALYRSLMSG RRMLVVLDNA ADADQVRPLM PSGRDSLVLV
TSRHLLTGLI VSHGAQQLTV APLSATDASD LVTAIVGASR TAAKPEAVTA LADSCARLPL
ALRIAAANVR ADRYRDIGDY VDELRHGDRL ASLSVDGDPT ASVRGTFDWS YARLSAPVQR
LFRQLGMVPG PGISAEAAAA LGGTGSAEAS RGLRALADAH LLEALPGQRY TFHDLLRAYA
TERGLAVDSP AEREAALRRL LDWYLRSATA AVELLFPTGL RLPLPESPAE VEAVAPTDRA
EALSWLTTER RNLVAAVTHA ADIGMYEPAW RLGDALNGYF DHAGYPVDWL AVGLAARTAA
ESDGDLAARS AAAINLAHAY HNGGDVDAAI PHGLDARSLA ARAGWTAGEA RALNRLAVLY
ADGGSLDRAA VLFAEALELD RRTGDRAGEA KRLMNLGLCA MLSGHLPDAA GYLREALDMP
GAATWRYATA LPNLGVVQRL MGDFDAAADT FGQALAASNQ DGTDLPFNHT EYAELCLDRG
RFDEAREHAD AAETIARDSG ERRSQVWALK TQAVIELRQG CPAEAAERFE RLLDIIGDQG
FFTQRVIALV GLADARRRLG RLEAAVAHAE EALALSRAKG HRIHEGEALT ALADIHLDRH
RAADPAALDQ ALAHAERALE LQRRTGHRLG EARTLIVLAH ITGHAGRDED AARIRDEAVA
LCDHIGLPEA EARLS
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