| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_2940 |
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| Symbol | |
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| ID | 8884139 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stackebrandtia nassauensis DSM 44728 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013947 |
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| Strand | - |
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| Start bp | 3088272 |
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| End bp | 3091862 |
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| Gene Length | 3591 bp |
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| Protein Length | 1196 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | |
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| Product | peptidase C14 caspase catalytic subunit p20 |
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| Protein accession | YP_003511708 |
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| Protein GI | 291300430 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.408455 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.000165978 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGCCGTC ATGCTCTCGT CGTCGGAGTG GCCAATTACC ACAAGGACCG GACTCTGTCC
CGGCTTCCCG CCGCGCACGC CGACATCAAT GTTGTCAGCC GGGTGCTGAA AGAGCGGGGT
GACTTTGATG TCAAAGCCAT CGTCGATCCC GACCACCAGG AACTGATCCG GGCGTTGGAG
GACTTGTTCG ACAACCGCAG TCCCGGCGAC ACCGCCTTGG TCTATTTCTC CGGCCACGGT
CTGCTCGACA AGAGTCTAGA GCGGTTGTAC CTTGCCACCA GCGACACCGA GGAAGGTCGG
CTCGACTCCT CATCGGTTGA CACCGAGGTG TTGCGCCGAT TCACCGCGAA AACCAGCGCT
CACTGCAAGC TGGTCTTCTT GGACTGCTGT TATGCGGGTA TGGCCGGCGA CGGGTTGAGG
GCCCGCAGCG GCCGGAAGGT TCCCATCTCG GCGCAGCTCA ACAAACACGG CACGGTCATC
CTCACCTCCA GTGATCGAAT CAGCCGGTCC TTTGAGGATC CGAAGGCAGC CCATCGCCCG
GCATTGTTCA CCGAAGCCGT GGTCGAGGGC CTCAACGGCG GTGCCGCTGA CACCGACGGT
GATGGATGGA TCAGCGTGCA AGATCTCGCC GATTATGTGC AACGATCGGA GAAACTGCGT
CACCAGACGC CGCAGATGTT CGCCAACGGC GTCACCGGCA GTATCCAGCT CACCCGGACC
ACGGCGAACA CCTCCAAACC GACCCACTCA CCGACGGTGG TCACGGTCAA CGGAGTCCCC
GAGCCGCTGC ACCCCGTATC AGATCCATTG GACAGTCGTA CCTGGGAACG GTTGCTGAAC
TACTACTTGG CTTGTCTGGC AGCGGAAGCC GGGCACGCTG GCTGGCTCAA GCCTGGGGAC
CCCTCGGGAC ATGTGGCCTG GCCGGGCGGG ACCGAACCAG TGTTCAGCGG ATCCGGTACC
GCGGTCGAGC TGCCCGAACA GGTCGACGAG TACATCACCG AGCGGGTACA GACGGCGGGG
TCGTTCCAGT ACGGGTACCC GGTCGTAGTA TTCGCCGAGG GCGAGCAGAA ACGCTTCGCT
CCACTGGTGG TAACCGAACT GGTGCCTGAC GGGGAGTCGA AGGCCAAGGC GGTCGCAGCC
GAGCTCAACA CGCAGGTACT GCGGGAAGCC GGCCTGGAGC AGACCGAGAT CATCGAGTTG
TCTGAACAGT TCGGACAGAA CTTCCGCTAT GCCAATCCAC AGCAGTTCGC CGAGCAGCTG
AAGCTCCTGA CCATCGGTAT CGGCTTGAAG ACGCCACAGG AACCGGATCC ATTGAACCTG
TCGACGCGTC TGTTCGATTC ACCGTTGGTT TCCGGGATCC AGAACCTCGC CGTCGTGCAT
CACGTCCCCG AACGCGGCAA GGCAACCGAC AAACTGGTTC AGGACCTCAG GGAAATGATC
ACCAAGATCC CGGAGTTCAC AGCCACCGCA CTGAGTGCCC TGGCACAACG ACAACCGGAT
CCGATCACGC ACTACCAGAC GCTGGTCTCC CCTGGCCCGC TCAACGAGTC CCAAGAAGCC
GTCATCGATT CGGCGATGAC CCGGCGGCTG ACCGTTGCCA CCGGTCCCCC GGGCACCGGG
AAGACCGCGC TGGTCACCGC TTTGACAGCC ACCGCCGTGG CGAACGGGCA GACGATCCTT
ATCGGATCGA CCAACAACAA GGCCGTCAAC GGTGTGCTGG ACAAGGCCAA TACCATCACA
CCAGGATTGC TGATGCGCAC CGGCAACAGA CAGATCGTCG CCAGAGAGCC GGACGTCCTC
AACCGGTTGA TAATGGACGC GAAGCCGACC GGAAATGCCA GCCTTTCGGC GGGCCGGGTG
CGCAACAGCC ACGCCCAGTT GACCACCCAC CGCTGTGAAC TCGATTTGCG CCGCCAGACC
GAGAACGACC TGCTGGCAAC GGTTCAGGAG TTGCAGCGGT TGCGAGAGGA GTTCAATCCG
TCCGCGGCCG TCGCGGAACT GCTCAACGCG CCGGACCCGG TTCTCGAACG AGCACTCGCA
CGCTCGCAAC GAGCGACAAA GCGTTGGCCA TTGGGCGTAA TAGCTCGGTA CTGGCTCCGC
AAGTGGTTGG AGATCACGGC CGTTGACAAG CGGCAAGACC TGGTTCGGCT GCTCGAACTG
GAGCACCAGC GTCGTGGCAT CAAGTCGAAT ATAGACTGTC TGCCGCCCGA GCAGGAAGTC
TGGAAGCAGG CACGGCAGGC AGTGGCCGAA CGGATCGCGC ACAGCAGCCA GCTGATCGCG
TCCATTATGA ACCACAACAT CAGCAACGGT CGCGCCGCGA TCCAGGAGCG TCTCGAGGTG
CTCAATCAGC AACCTCCGAA GACCTGGCGC GGATTTCAGC GGTTGTTGCG TCATCTACCC
GGTTGGGCCG TCACCGGGCA TTCGTCACGC GTGATACAAC CCAAACCAGC ACTCTTCGAC
CTCGTCGTCA TCGATGAGGC GGCACAGTGC CCGACTCCGA TGGTGCTGGC CTTGCTCATG
CGCGCCAAAC GGGCCCTGAT CATCGGTGAC CCCCATCAGA TTCCGCCGGT GGCGGAACTG
AGTCAGTCGT ACGACGACTT GTTGCGGCGT AAGCACAAGC TGGGTGAGGA CTGGCTGAAG
GAACGCCGCC TCAACTATGT GGGTGGTTCG ATCTACCACG CATGCGCGCT GGCGGCAGGC
GAAGTCGCAC TGCTGGACGA GCATTACCGC TGCGATCCCG CCATCGTGGC AACTCCGAAC
CGGGTCGTGT ACCAAAAGCA GCTGTCGGTG CTCACCGACA CGACCCGGCT AGCGATACCG
GCGGCACCAC CCGATACTCC CGCCGTCGAG GTCATCGACC TTCCAGGAAC GGTCACTCAT
CCGGGTAAGA AGTCGTGTTT CAACTCGGTA GAAGCCGATC GCGTCGTGGA ACTGGCGGCA
GGGTTGCGAG TCAAGTATCC GGACGCCTCC ATCGGTGTCG TGTCCCCATT CCGGGCCCAC
GTCAACCTTG TTGAGGGCAA GCTGACCGAA CTGAAGCTGG AACCGGAGGT CGTCGTAGGC
ACCGCGCATA CCTTCCAGGG GGACGAATGC GACATCATCA TCCTGTCCCC TGTCGGCAGT
GACGGCATCC GTGAAATGTC AGCACAATGG ATGGTCAAGC AGACCAATCT GTGGAATGTG
GCCATCACTC GCGCCAAGTC CCGATTGTTC GTCGTGTGTG ACCGCGGTTG GTGGGGACAG
CACCCCAGTC TGCTAACGCA GCTTCTCGAA GAGACCGAGA ATCATGATGT CGACGACGCC
AGTTCCGAAC TGGTCGACCG GCTGCAAGGC GAACTGGACG CTGCCGGAGT CGAAATCATC
GCCAGGGATC AGCCGATCGC CGGCCAGCAC TGTCATCTAC AGATCGCGGG CGCTCGTAGG
CCACGAGCCC TGTTCGTGGA CTTGGGCGAA CCTGACGAGG GCAAGGCTTA CCGGCAGCTG
CTCGCCAAGC TCGACCTGAT CGCCGGTGCC GGAGTCGAAC CGATTCGTAT CCCCGCGTGG
CGTTGCCTTT CCGAGCCGGA CGCCGTAGCT CGCGAGTTGG CCCAGTCCTG A
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| Protein sequence | MSRHALVVGV ANYHKDRTLS RLPAAHADIN VVSRVLKERG DFDVKAIVDP DHQELIRALE
DLFDNRSPGD TALVYFSGHG LLDKSLERLY LATSDTEEGR LDSSSVDTEV LRRFTAKTSA
HCKLVFLDCC YAGMAGDGLR ARSGRKVPIS AQLNKHGTVI LTSSDRISRS FEDPKAAHRP
ALFTEAVVEG LNGGAADTDG DGWISVQDLA DYVQRSEKLR HQTPQMFANG VTGSIQLTRT
TANTSKPTHS PTVVTVNGVP EPLHPVSDPL DSRTWERLLN YYLACLAAEA GHAGWLKPGD
PSGHVAWPGG TEPVFSGSGT AVELPEQVDE YITERVQTAG SFQYGYPVVV FAEGEQKRFA
PLVVTELVPD GESKAKAVAA ELNTQVLREA GLEQTEIIEL SEQFGQNFRY ANPQQFAEQL
KLLTIGIGLK TPQEPDPLNL STRLFDSPLV SGIQNLAVVH HVPERGKATD KLVQDLREMI
TKIPEFTATA LSALAQRQPD PITHYQTLVS PGPLNESQEA VIDSAMTRRL TVATGPPGTG
KTALVTALTA TAVANGQTIL IGSTNNKAVN GVLDKANTIT PGLLMRTGNR QIVAREPDVL
NRLIMDAKPT GNASLSAGRV RNSHAQLTTH RCELDLRRQT ENDLLATVQE LQRLREEFNP
SAAVAELLNA PDPVLERALA RSQRATKRWP LGVIARYWLR KWLEITAVDK RQDLVRLLEL
EHQRRGIKSN IDCLPPEQEV WKQARQAVAE RIAHSSQLIA SIMNHNISNG RAAIQERLEV
LNQQPPKTWR GFQRLLRHLP GWAVTGHSSR VIQPKPALFD LVVIDEAAQC PTPMVLALLM
RAKRALIIGD PHQIPPVAEL SQSYDDLLRR KHKLGEDWLK ERRLNYVGGS IYHACALAAG
EVALLDEHYR CDPAIVATPN RVVYQKQLSV LTDTTRLAIP AAPPDTPAVE VIDLPGTVTH
PGKKSCFNSV EADRVVELAA GLRVKYPDAS IGVVSPFRAH VNLVEGKLTE LKLEPEVVVG
TAHTFQGDEC DIIILSPVGS DGIREMSAQW MVKQTNLWNV AITRAKSRLF VVCDRGWWGQ
HPSLLTQLLE ETENHDVDDA SSELVDRLQG ELDAAGVEII ARDQPIAGQH CHLQIAGARR
PRALFVDLGE PDEGKAYRQL LAKLDLIAGA GVEPIRIPAW RCLSEPDAVA RELAQS
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