Gene Snas_2922 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_2922 
Symbol 
ID8884121 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp3072593 
End bp3073246 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content71% 
IMG OID 
Productglycosyl transferase family 2 
Protein accessionYP_003511690 
Protein GI291300412 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.895357 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.00151129 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACCGAAG CCGACGTGAT CCTCCCCTGT CTCAACGAGG CCGAGGCGCT GCCGTGGGTG 
CTGGAACGCA TCCCGGTGCG GTTTCGTCCC ATCGTCGTCG ACAACGGCTC CACCGACGGC
TCAGCGGACC TGGCCGCCTC CCTCGACGCC ACCGTGGTGA CCGAGACCCG CCGCGGCTTC
GGCGCCGCCT GCCACGCGGG CCTGGAGGCC GCCACCGCCG ACATCGTGTG CTTCTGCGAC
TGTGACGCCT CCATGGACCC ACGACTGTTG CGCTCCATGG TGGAGTCGAT ACGCGACGAC
GACACCGACC TGGTGCTGGG CCGACGCCGC CCCACCACGA TGCGCGCCTG GCCGCTGCAC
GCCCGGTTCG GCAACATCGC GCTGGCCCGG ATGGTGCGCC GCCGCACCGG AACCCGGCTG
CGGGACCTGG GACCGATGCG GGCCGCGCGC CGTACCGCGC TGCTCGACCT GGGCATCACC
GACCGTCGCT CCGGCTATCC ACTGGAGATG GTCGTCAAAG CCGCCGACGC GGGCTGGCGC
ATCGACGAGG TCGACATCCC CTACCTGCCC CGCTCCGGGA AGTCCAAAGT GACCGGAACC
TGGCGCGGCA CCTGGCAGGC CGTCCACGAC ATGCGGGAGG TGTTGCAGCG ATGA
 
Protein sequence
MTEADVILPC LNEAEALPWV LERIPVRFRP IVVDNGSTDG SADLAASLDA TVVTETRRGF 
GAACHAGLEA ATADIVCFCD CDASMDPRLL RSMVESIRDD DTDLVLGRRR PTTMRAWPLH
ARFGNIALAR MVRRRTGTRL RDLGPMRAAR RTALLDLGIT DRRSGYPLEM VVKAADAGWR
IDEVDIPYLP RSGKSKVTGT WRGTWQAVHD MREVLQR