Gene Snas_2915 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_2915 
Symbol 
ID8884114 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp3066576 
End bp3067952 
Gene Length1377 bp 
Protein Length458 aa 
Translation table11 
GC content68% 
IMG OID 
Productdrug resistance transporter, EmrB/QacA subfamily 
Protein accessionYP_003511683 
Protein GI291300405 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.230559 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.00656628 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGAGAAAAT TGTGGGTACT GGCCGCACTG TGCGCGGCCC AGTTCATGGC CATTGTGAAC 
ATCAGCGTGG TCAATGTGGC CTTGCCCGCG ATACAAAAAG ACCTCGACAC CTCCCTGGCG
GGCCTGCAGT GGGTCCTCAA CGCGTTCACC ATCTGCATCT CCGCGCTGAC GCTGGCCGGG
GGCTCGCTGG GTGACCGGTT CGGACGCAAG CGCGTGTTCG TCACCGGCCT GGCCGCGTTC
ATCGTGGGCA CCGTCGTTTG TGCTGTGTCG GTGAACCTGG GCATGCTCAT CACCGGTCGA
CTGATCCAGG GAATCGCGGC CGCGCTGCTG CTCCCCGGTT CACTGTCCAT TCTGGCGCAG
ACGTTCACCG ACCCCGCCGA ACGCGTCCGC AGGATCGGGA TCTGGGCGGC GGTGTCGGCC
GTGGGCCTCG TCATCGGACC GGTGGTCGGT GGCGTACTCA TCCAGGCGTT CGGCTGGCCG
TCGCTGTTCT GGCTGTGCGT CCCGTTGGGC GTCACGGCAC TGATCGCGAC CCTGGTGTTC
GTGCCCGAAT CGGCCAACCC CGAGCACGCC GCGATCGACC CGCTGGGCCA GATCCTGGCG
ATGCTGTCGC TGGGCTCGCT GTCGTTCGGG CTCATCCGCT TGGGCGACAA GGGCTGGGAC
GACACCGTGG CCCTGATCGT CACCGGAACC GCGCTGGTGC TGTTCGTGGT GTTCATCGTG
GTCGAACTGC GTACCCGGAC CCCGATGCTG CCGGTGCGGC TGTTCGCCGA CCGCAGCTTC
GCCGCCATGA ACTTCGCCTC CGCCAGCCTC GGCTTCGGAC CGTACACGAT GTACGCGTTC
CTGGCCCTGT ACCTGCAACA GGAACGCGAC TTCTCGGCGC TGTCGGCGGG CCTGGCCTTC
GTCCCGATGT CGATAGCCAC CGCGATCGTC GCGCCGCTGG CCGGACGCTG GGTGGGTGCC
TCCGGCCCGG TTCCGGCGAT GCTGGCCGGA TACGGCTCCT CGGCCGTGGG CCTGGCGGGT
GTGGCCCTGT TCGACGCCCA CACGTCCTGG TTCCTGATGG GCCCCGTGTT CGTCCTCATC
GGCGTCGGCA TGGGCTTGTC GATGACCCCC ACGACCAACG GCGCCGTGGA CGCCGTGCCC
CGCGAACGCT CGGGCATCGC CTCGGCCACG ATCAACACCA CCCGCCAGAC CGGCCTGGCC
ATCGGCATCG CCCTACTGGG GGCGATGGTG TCGGCGCAGG ACAACTTCCT CACCGGCCTT
CGGCTGGTGG CCGCGGTGAC GGCACTGGTG TCGCTGATCG CGGTGGTGTA CATCCTGGCC
GGACGCGTCG CCACCCGTCC CCGCACTCCG GCGGAGGCGA CGGCTTCGGC CAGCTGA
 
Protein sequence
MRKLWVLAAL CAAQFMAIVN ISVVNVALPA IQKDLDTSLA GLQWVLNAFT ICISALTLAG 
GSLGDRFGRK RVFVTGLAAF IVGTVVCAVS VNLGMLITGR LIQGIAAALL LPGSLSILAQ
TFTDPAERVR RIGIWAAVSA VGLVIGPVVG GVLIQAFGWP SLFWLCVPLG VTALIATLVF
VPESANPEHA AIDPLGQILA MLSLGSLSFG LIRLGDKGWD DTVALIVTGT ALVLFVVFIV
VELRTRTPML PVRLFADRSF AAMNFASASL GFGPYTMYAF LALYLQQERD FSALSAGLAF
VPMSIATAIV APLAGRWVGA SGPVPAMLAG YGSSAVGLAG VALFDAHTSW FLMGPVFVLI
GVGMGLSMTP TTNGAVDAVP RERSGIASAT INTTRQTGLA IGIALLGAMV SAQDNFLTGL
RLVAAVTALV SLIAVVYILA GRVATRPRTP AEATASAS