Gene Snas_2876 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_2876 
Symbol 
ID8884075 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp3027602 
End bp3028630 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content72% 
IMG OID 
Producttranscriptional regulator, LacI family 
Protein accessionYP_003511644 
Protein GI291300366 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.900808 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCATCGC GAACCCCGGC GGGCCCGGTC ACCATGGAGG ACGTCGCGCG CGAAGCCGGT 
GTGTCGCGGG CCGCGGTGTC CAAGGTGATC CGCGACGCCC ACGGGGTCAG CGCCGCGATG
CGCGAACGGG TCACGACGGC CATCGCGACG CTCGGCTACC GTCCCAACGT CTCGGCCCGT
GGCATGCGCG GCGCCACCTA CACGCTCGGC ATCGAGATCC CCGAACTGGC GAACCCGTTC
TTCCCGCGCC TGCTCGCCGG GGTGACGGCG GCGGTGTCCG CGTCGCCGTA CCAACTCATC
GTCGCCCCGG CCGATCCGGC CAACGTGGAG GGTTATCGCG CCATCCAGGC GCTCGTCGAC
CGGCAGGTCG ACGGCGTCAT CGCGGTCTCG CCGCTGGTGG AGCCCGCGTG GCTGGAAGCC
CTGGCCGCGA CGGTGCCGGT GGTGATGCTC GGACGGCACG ACCGTGCCAG CGGATACGAC
ACCGTCGCGA ACGACGACGA GGCCGGGACC CGCCAGGCGA TGCGGCACCT CATTGATCTC
GGACACCGCG ACATCGCCCA CCTCACCTGC GAGGAGACGA AGACCGTTCC CGGTTCCGGT
GTGCCGCAGG CGATCCGGCT CGAAACCTAT CGCGAGGTCA TGCGGGAGTC CGGGCTCGAC
GCCCACATCC GGGTCGTCCG CACGCCCACG GGCGAGGCCG GGGCGTGCCG CACCGCGACG
CGGTTGCTGA CCGGCCCCGA GCGGCCGACG GCGATCTTCG CCTCCCACGA CGAACCGGCG
CTGGGGGTGC AGCGCGCCAT CGCCGAAGCC GGACTGACCC CCATGGACGT CTCCGTCGTC
GGCTACGACG ACATCGAGAT CGCCCGGCAC CCGGGAGTCT CACTCACCAC GGTGAACCAG
GACGGCGAGC GGATCGGCCG TCTCGCCGCC GAACTGCTGC TGGAACGCAT CGCGGGGCGA
ACCGAGCCGC GACAGGAGAT CGTGCGGCCC GAGCTCGTCG TGCGGTCCAG CACCCGGCCA
CCGCCCTGA
 
Protein sequence
MASRTPAGPV TMEDVAREAG VSRAAVSKVI RDAHGVSAAM RERVTTAIAT LGYRPNVSAR 
GMRGATYTLG IEIPELANPF FPRLLAGVTA AVSASPYQLI VAPADPANVE GYRAIQALVD
RQVDGVIAVS PLVEPAWLEA LAATVPVVML GRHDRASGYD TVANDDEAGT RQAMRHLIDL
GHRDIAHLTC EETKTVPGSG VPQAIRLETY REVMRESGLD AHIRVVRTPT GEAGACRTAT
RLLTGPERPT AIFASHDEPA LGVQRAIAEA GLTPMDVSVV GYDDIEIARH PGVSLTTVNQ
DGERIGRLAA ELLLERIAGR TEPRQEIVRP ELVVRSSTRP PP