Gene Snas_2864 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_2864 
Symbol 
ID8884063 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp3016030 
End bp3018216 
Gene Length2187 bp 
Protein Length728 aa 
Translation table11 
GC content65% 
IMG OID 
ProductRTX toxins and related Ca2+-binding protein- like protein 
Protein accessionYP_003511632 
Protein GI291300354 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.792912 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCGAGC CCGAAATCAA TGTGGACCGT CGGTGGTGGC GGTTGGATGC TGACACTTCC 
AAGATCACTG CGGCGTCCAC GGGGTGGAAG AACCTGGGCA CCGCCGTGGA CAAGGCCGGT
GACGACGTGT TCAAGAAGGC CAAGGTCGTC TACGACGACG GCTGGGAAGG CAAGGGCCGC
ACCGCTTACG AGGGGCATCA GCAGAAGATC AGCAAGGCCT TGGTCGATCT GAAGAAGAAG
GCCGACGCCG TGGACACCGC GTTGGACAAC ATCGCCAACG CGATCACCGC CAAACAGGGG
CAACTGACGA CCGCCGAGGG CGCGATCACT GGCGCGGTGC CGTGTGTCGT CGGCGACGAC
AAGATCAACT TCAAACCCGC CAACCCCGAG CAGTCCAAAG CTGTCATCGA GGCGGTGCGG
GCCGCCAAGG GGATCCGCGC CGACCTCGAC AAGCAACTGG GCACCGAAGC GGGCAACCTC
AAGACCGCGG CTTCCGATTT CGCGGACGTG ACGATCAAGT GGGGTTCGGT GGCGGAAGGC
TTTAAGGAGC CGTTCGATCT GCCGCCGGAG TCCACGAGGG TTCCGCGCAC GATCACGCTG
CCGGACGGCC GGGTCATCAT GAACACGGGG ACGGGCAATG ATGACGTCAA GGTCACCACG
GATGACAAGG GCAATGTCAT CGTGGAGTCC AACGGCACCA AACACACCTA TCCACCGGGC
ACCAACATCA CCGTCCGGGG CGGCCAAGGC GACGACACCA TCAAGGTGGA CGCCAAGGGC
GTTCAGGTCA CCAGCCTGGG TGGCGCGGGC AAGGACACCA TCGACGCCGG CAACCCGCTG
TTCCCGTTCG GTGGCGACAA GGACGGCAAC AACACGATCA TCTCCGGCGA CGGCGACGAC
ACCGTGACGA CCGCTGGTGG CGACAACCGC GTCTCCACCG GAGCCGGCAA GGACACCGTC
ATGACCGGCG ACGGCAACGA CAACATCTCC ACCTACAGTG GCGATGACTC GGTGCTCGAC
CTGGGCGGCA AGAACGACAT CTCCACCGGC GCGGGTGCCG ACACCGTCAG CGCCGGGGGC
GACAACCACG TGTACTCCGG CGACGGTGCC GACAAGATCA ACACCGGCGG CGGTCGCGAC
GTCATCGCCT CCGGCGAGGG CAACGACCGG GTGCAGGCCG GTAAGGGTGA CGACCGGGTC
TTCGCCGGAG AAGGCGCCGA TTACGTCGAC GGCCAGGACG GCAACGACCA CCTGGAAGCC
GGAGCCGGGG AGCGCAAGAC CGACGGCCAC GGCAACACCT ACTACCAGGG CGACACCATG
TACGGCGGCG ACGGTGACGA CACCCTGGCC GGTGGCGACG CCAACGACTA CCTGGATGGC
GGCACCGGCA ACGACAAGGT CACCGGTGGC GGTGGCAACG ACGTGGTGTC CGGTGGCAAG
GGCGACGACA CGTTGGACGG TGGTGAGGGC AAGGACGTCA TGTACTCCGG CTTCGGCAAG
GACTCGGTGA CCGGCGACGC CGACGACACC GCCTACGTCC AGGACGGCGA GGACAAGGTG
GACGGTGTCG GTACCAAGCA CCACGTGAAG CCGATCGACG CCGACCAGCT GGTGAAGGAC
GGCGTCATCA AGATCGAAGG CTCCGAGGAG TTCAAGGACC GGATGCTGGC CGACCTCAAC
ACCTTCGGGT CGTCCCCGAC GGGCGGGGAA ATGCTCAACC TCTACAAAGA CCACATGAGC
GACACCTTCA ACAACGACTC GTTCACGATC AAGGAACTCA AACTCGACCC CGACAACGAG
GACCGGGACG AGGAGTGGGA GGTCGAGAAC GGCTACGCCC GCAACAACGG CGTCGTCAGC
GACGACATCG AGATCGAGAT CAACCCGGCG TTCCACCTCG ACGACGGACC CGGCGGCAAC
CCGGCCGTGG TCATGTACCA CGAGATGGCG CATGGGGCCA GCCACCTGCT GGACGTCCAC
GATCACGACA AGATCGGCGG CAACGGGCCG GACAAGGACA TCGCCAAGTC GGAGCGGCAG
GCGGTGGGTC TGCCCACCGA CGGGCGCGAC TACGACCCCA ATAACCCGAG CGGCAACCTG
GAGCAGAAGT ACGCTTACAC CGAAAACGGT CTGCGGGACG AAATGGGTCT CGATCCGCGT
GAAACCTACG CCTCAGACAG GAAGTAA
 
Protein sequence
MVEPEINVDR RWWRLDADTS KITAASTGWK NLGTAVDKAG DDVFKKAKVV YDDGWEGKGR 
TAYEGHQQKI SKALVDLKKK ADAVDTALDN IANAITAKQG QLTTAEGAIT GAVPCVVGDD
KINFKPANPE QSKAVIEAVR AAKGIRADLD KQLGTEAGNL KTAASDFADV TIKWGSVAEG
FKEPFDLPPE STRVPRTITL PDGRVIMNTG TGNDDVKVTT DDKGNVIVES NGTKHTYPPG
TNITVRGGQG DDTIKVDAKG VQVTSLGGAG KDTIDAGNPL FPFGGDKDGN NTIISGDGDD
TVTTAGGDNR VSTGAGKDTV MTGDGNDNIS TYSGDDSVLD LGGKNDISTG AGADTVSAGG
DNHVYSGDGA DKINTGGGRD VIASGEGNDR VQAGKGDDRV FAGEGADYVD GQDGNDHLEA
GAGERKTDGH GNTYYQGDTM YGGDGDDTLA GGDANDYLDG GTGNDKVTGG GGNDVVSGGK
GDDTLDGGEG KDVMYSGFGK DSVTGDADDT AYVQDGEDKV DGVGTKHHVK PIDADQLVKD
GVIKIEGSEE FKDRMLADLN TFGSSPTGGE MLNLYKDHMS DTFNNDSFTI KELKLDPDNE
DRDEEWEVEN GYARNNGVVS DDIEIEINPA FHLDDGPGGN PAVVMYHEMA HGASHLLDVH
DHDKIGGNGP DKDIAKSERQ AVGLPTDGRD YDPNNPSGNL EQKYAYTENG LRDEMGLDPR
ETYASDRK