Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_2864 |
Symbol | |
ID | 8884063 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | + |
Start bp | 3016030 |
End bp | 3018216 |
Gene Length | 2187 bp |
Protein Length | 728 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | |
Product | RTX toxins and related Ca2+-binding protein- like protein |
Protein accession | YP_003511632 |
Protein GI | 291300354 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.792912 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTCGAGC CCGAAATCAA TGTGGACCGT CGGTGGTGGC GGTTGGATGC TGACACTTCC AAGATCACTG CGGCGTCCAC GGGGTGGAAG AACCTGGGCA CCGCCGTGGA CAAGGCCGGT GACGACGTGT TCAAGAAGGC CAAGGTCGTC TACGACGACG GCTGGGAAGG CAAGGGCCGC ACCGCTTACG AGGGGCATCA GCAGAAGATC AGCAAGGCCT TGGTCGATCT GAAGAAGAAG GCCGACGCCG TGGACACCGC GTTGGACAAC ATCGCCAACG CGATCACCGC CAAACAGGGG CAACTGACGA CCGCCGAGGG CGCGATCACT GGCGCGGTGC CGTGTGTCGT CGGCGACGAC AAGATCAACT TCAAACCCGC CAACCCCGAG CAGTCCAAAG CTGTCATCGA GGCGGTGCGG GCCGCCAAGG GGATCCGCGC CGACCTCGAC AAGCAACTGG GCACCGAAGC GGGCAACCTC AAGACCGCGG CTTCCGATTT CGCGGACGTG ACGATCAAGT GGGGTTCGGT GGCGGAAGGC TTTAAGGAGC CGTTCGATCT GCCGCCGGAG TCCACGAGGG TTCCGCGCAC GATCACGCTG CCGGACGGCC GGGTCATCAT GAACACGGGG ACGGGCAATG ATGACGTCAA GGTCACCACG GATGACAAGG GCAATGTCAT CGTGGAGTCC AACGGCACCA AACACACCTA TCCACCGGGC ACCAACATCA CCGTCCGGGG CGGCCAAGGC GACGACACCA TCAAGGTGGA CGCCAAGGGC GTTCAGGTCA CCAGCCTGGG TGGCGCGGGC AAGGACACCA TCGACGCCGG CAACCCGCTG TTCCCGTTCG GTGGCGACAA GGACGGCAAC AACACGATCA TCTCCGGCGA CGGCGACGAC ACCGTGACGA CCGCTGGTGG CGACAACCGC GTCTCCACCG GAGCCGGCAA GGACACCGTC ATGACCGGCG ACGGCAACGA CAACATCTCC ACCTACAGTG GCGATGACTC GGTGCTCGAC CTGGGCGGCA AGAACGACAT CTCCACCGGC GCGGGTGCCG ACACCGTCAG CGCCGGGGGC GACAACCACG TGTACTCCGG CGACGGTGCC GACAAGATCA ACACCGGCGG CGGTCGCGAC GTCATCGCCT CCGGCGAGGG CAACGACCGG GTGCAGGCCG GTAAGGGTGA CGACCGGGTC TTCGCCGGAG AAGGCGCCGA TTACGTCGAC GGCCAGGACG GCAACGACCA CCTGGAAGCC GGAGCCGGGG AGCGCAAGAC CGACGGCCAC GGCAACACCT ACTACCAGGG CGACACCATG TACGGCGGCG ACGGTGACGA CACCCTGGCC GGTGGCGACG CCAACGACTA CCTGGATGGC GGCACCGGCA ACGACAAGGT CACCGGTGGC GGTGGCAACG ACGTGGTGTC CGGTGGCAAG GGCGACGACA CGTTGGACGG TGGTGAGGGC AAGGACGTCA TGTACTCCGG CTTCGGCAAG GACTCGGTGA CCGGCGACGC CGACGACACC GCCTACGTCC AGGACGGCGA GGACAAGGTG GACGGTGTCG GTACCAAGCA CCACGTGAAG CCGATCGACG CCGACCAGCT GGTGAAGGAC GGCGTCATCA AGATCGAAGG CTCCGAGGAG TTCAAGGACC GGATGCTGGC CGACCTCAAC ACCTTCGGGT CGTCCCCGAC GGGCGGGGAA ATGCTCAACC TCTACAAAGA CCACATGAGC GACACCTTCA ACAACGACTC GTTCACGATC AAGGAACTCA AACTCGACCC CGACAACGAG GACCGGGACG AGGAGTGGGA GGTCGAGAAC GGCTACGCCC GCAACAACGG CGTCGTCAGC GACGACATCG AGATCGAGAT CAACCCGGCG TTCCACCTCG ACGACGGACC CGGCGGCAAC CCGGCCGTGG TCATGTACCA CGAGATGGCG CATGGGGCCA GCCACCTGCT GGACGTCCAC GATCACGACA AGATCGGCGG CAACGGGCCG GACAAGGACA TCGCCAAGTC GGAGCGGCAG GCGGTGGGTC TGCCCACCGA CGGGCGCGAC TACGACCCCA ATAACCCGAG CGGCAACCTG GAGCAGAAGT ACGCTTACAC CGAAAACGGT CTGCGGGACG AAATGGGTCT CGATCCGCGT GAAACCTACG CCTCAGACAG GAAGTAA
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Protein sequence | MVEPEINVDR RWWRLDADTS KITAASTGWK NLGTAVDKAG DDVFKKAKVV YDDGWEGKGR TAYEGHQQKI SKALVDLKKK ADAVDTALDN IANAITAKQG QLTTAEGAIT GAVPCVVGDD KINFKPANPE QSKAVIEAVR AAKGIRADLD KQLGTEAGNL KTAASDFADV TIKWGSVAEG FKEPFDLPPE STRVPRTITL PDGRVIMNTG TGNDDVKVTT DDKGNVIVES NGTKHTYPPG TNITVRGGQG DDTIKVDAKG VQVTSLGGAG KDTIDAGNPL FPFGGDKDGN NTIISGDGDD TVTTAGGDNR VSTGAGKDTV MTGDGNDNIS TYSGDDSVLD LGGKNDISTG AGADTVSAGG DNHVYSGDGA DKINTGGGRD VIASGEGNDR VQAGKGDDRV FAGEGADYVD GQDGNDHLEA GAGERKTDGH GNTYYQGDTM YGGDGDDTLA GGDANDYLDG GTGNDKVTGG GGNDVVSGGK GDDTLDGGEG KDVMYSGFGK DSVTGDADDT AYVQDGEDKV DGVGTKHHVK PIDADQLVKD GVIKIEGSEE FKDRMLADLN TFGSSPTGGE MLNLYKDHMS DTFNNDSFTI KELKLDPDNE DRDEEWEVEN GYARNNGVVS DDIEIEINPA FHLDDGPGGN PAVVMYHEMA HGASHLLDVH DHDKIGGNGP DKDIAKSERQ AVGLPTDGRD YDPNNPSGNL EQKYAYTENG LRDEMGLDPR ETYASDRK
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