| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_2855 |
|---|
| Symbol | |
|---|
| ID | 8884054 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stackebrandtia nassauensis DSM 44728 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013947 |
|---|
| Strand | + |
|---|
| Start bp | 3005000 |
|---|
| End bp | 3006451 |
|---|
| Gene Length | 1452 bp |
|---|
| Protein Length | 483 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | |
|---|
| Product | extracellular solute-binding protein family 1 |
|---|
| Protein accession | YP_003511623 |
|---|
| Protein GI | 291300345 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.830086 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCCCA CCCCAAACAA GGGCGACCTT AGCCGTCGCC GTGTCCTGCA GGGAACCGCC
CTGGGCGCCG CCGCGATCCC CGCCGCCGGA CTGCTCAGCG CCTGTGCCAC CGGTGGCGGC
GGCGAAGGCG AGGACGTCAA GAACTCCGGT GACGCGAAGA ACCCGTTCGA TGTGGACGGT
TCCAAGCCGC TGGACGTCGT GATCTTCAAC GGCGGCTTCG GCGTCGAGTA CGCGGACGAG
AAGACCGGCC ACGTCTCGCT GTACAAGAAG AAGTTCAAGA AGTCCGACGC CAAGATGACG
TCGCAGAAGA ACATCAAGAA GACCCAGATG AACCGGTTCG CGGACTCCAA GCCCGCGGAC
GTCATCGACA ACTCCGGTGC CGACAAGATC GCGCTGGACA CCCTCGTCAA CGACGGTCTG
CTCGCCGAGC TGACCCCGCT GCTGAAGGCG CCGTCCATCG ACGACCCGGA CAAGACCGTC
GAGGAGACCC TCATCGGTGG CGCGCTGCGC CAGGGCACCT TCAACGTGGA CGGCAAGCCG
AAGGTCTTCG CGCTGCCGTA CATCACCGAG GGCTGGTTCA TCTGGCACAA CGGCGCCCTC
TTCAAGGAGA AGGGCTGGGA CGTCCCCAAG ACCTGGGAAG AGATGCTGGA CCTGGCCAAG
GACATGAAGA AGGACGGCGT CGCGCCGTGG ACCTTCACCG GCGTCCACCC CTACTACCTG
TGGGACACCC TGTACACCCT GGCGGCCCGC GACGGCGGCC GTGAGGTCGT GCAGGACATC
GACAACCTCA AGGCCGACGC GTGGGGCAAC GCCTCCATCG AGAAGGCCGC CGAGGCGATG
TACAAGCTGC AGGAGAAGGG CTACACCCTC GAGGGTTCGC CCGGCCTGGA CCACACCAAG
TCCCAGCTGA AGTGGTACGA CGGCGACGCC GCGTTCATCC CGGTCGGCAC CTGGCTGCCG
CTGGAGCTGT CGAACGACCT CGCCAAGGAC AACAAGAAGA TCAGCGACGA CTTCGAGTTC
AAGGCCACCG GCGTCTTCGC CTTCGAGGGC TCCAAGAGCC CCGACATGCT GTGGCTGTCG
GGCGGCGAGC CGTTCGTCGT CCCGGAGGAG GCCGCCAACA AGCCGGGCGC CTACGAGTAC
CTGCGGATCA TGCTGTCCAA GGAGGGCTCG AAGGTCTTCA CCGACGCCAC CAAGTCGCTG
TCCGTCCTGG ACGGTCAGAA GACCGACGAC CCGGTCGCGA GCCAGGTCGT CGCCCTCAAC
AAGGGCCCGG ACAACCTGCA TCGTCCGCAG GTCATGGACT GGTACGTCGA CTTCAAGGAG
CCGGTGGAGC CGCTGCTCAC CAAGATGATG AAGGGCGACA TGAAGCCGGA CGCGTTCCTC
AAGGCCGCCC AGAAGGCCGC CGACAAGGTC GCCGCCAACG ACAAGATCGA CAAGTTCAAG
CAGGAGTACT AA
|
|---|
| Protein sequence | MSPTPNKGDL SRRRVLQGTA LGAAAIPAAG LLSACATGGG GEGEDVKNSG DAKNPFDVDG
SKPLDVVIFN GGFGVEYADE KTGHVSLYKK KFKKSDAKMT SQKNIKKTQM NRFADSKPAD
VIDNSGADKI ALDTLVNDGL LAELTPLLKA PSIDDPDKTV EETLIGGALR QGTFNVDGKP
KVFALPYITE GWFIWHNGAL FKEKGWDVPK TWEEMLDLAK DMKKDGVAPW TFTGVHPYYL
WDTLYTLAAR DGGREVVQDI DNLKADAWGN ASIEKAAEAM YKLQEKGYTL EGSPGLDHTK
SQLKWYDGDA AFIPVGTWLP LELSNDLAKD NKKISDDFEF KATGVFAFEG SKSPDMLWLS
GGEPFVVPEE AANKPGAYEY LRIMLSKEGS KVFTDATKSL SVLDGQKTDD PVASQVVALN
KGPDNLHRPQ VMDWYVDFKE PVEPLLTKMM KGDMKPDAFL KAAQKAADKV AANDKIDKFK
QEY
|
|---|
| |