Gene Snas_2848 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_2848 
Symbol 
ID8884047 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp2998686 
End bp2999699 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content71% 
IMG OID 
Productinner-membrane translocator 
Protein accessionYP_003511616 
Protein GI291300338 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.172129 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.525645 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGGTGC TGGAACAGGA GCGCACGACG ACCGCCCCCG GTCGCCGTGC CTTCAACCCG 
CTGCGGCTGT GGCCGCTGGC GGTGGTCGCC GTCCTCGCCT GTGTACCGTT CATAGTGGAC
GACTACACCC TGATCACCGG GAATCGGGTG TTGTCGCTGG GGCTGCTGGC CGCCAGCGTC
GCCTTGCTGA CCGGTACCGC GGGACTGCCG TCGCTGGGAC AGGCCGCGCC GTACGGCATC
GGCGCCTACC TCGCCTACAA CCTCGCCGAA CTGGACTGGA CCTTCGCGCC GCTGCAGGTG
GTCGCCGCGG CGGCGGCCGG TGCGCTCTTC AACGCGGTCA CCGGACCGGT CGTCGTGCGC
ACCCGCGGCG TCGTCTTCCT CATGGTGACC CTCGCGGTGG GGGAGATCGC CGTGGTCGCG
GCCGGGAAAT GGGAGTCGGT CACCAACGGC ACCGACGGCA CCGGCCGGAT CCCGCCGGGC
GAGCTGATCC CCGGCGAGCC GCTCGTCGAC GACGCGAACC TGTACTGGTA CGCCCTGGGC
GTGGCCGTCG TCGTCATCAC CGCGATGGTG CTGGTGCAGC GGTCCCGGGG CGGCAAGCTG
CTGCACGGCT CCCGCGACAA CGAGATGCGG ATGCGCGCCA GCGGACACCG CGTCTCGGGT
TACCTGCTGC TGACCTACAT CGCCGCGGGC GCGATCGCCG GTGTCGGCGG ATCGGTGCTG
GCCACCACGC AGCGCTACGT CTCGCCCTCT GACATGGACT TCTCGGTGGC GGCGCTGATC
CTGCTGGCGG TGGTCATCGG CGGCGCGTTC TCGATCACCG GGGCACTGGC GGGGGTCCTG
CTCGTCATCG TCGCCCGCGA CCTGATCGGC AACCACCTGC CCGGCCAGGG GCCGCTGCTG
CTCGGCATCC TGTTCATCGT CGCGGTCTAC CTGCTGCCCA ACGGCCTGGC CGGACGCCTG
GGCGACCTGA CCCGGTTGTT GACCCGCAAA CGTGACCGCG AGGAGGCGAC ATGA
 
Protein sequence
MTVLEQERTT TAPGRRAFNP LRLWPLAVVA VLACVPFIVD DYTLITGNRV LSLGLLAASV 
ALLTGTAGLP SLGQAAPYGI GAYLAYNLAE LDWTFAPLQV VAAAAAGALF NAVTGPVVVR
TRGVVFLMVT LAVGEIAVVA AGKWESVTNG TDGTGRIPPG ELIPGEPLVD DANLYWYALG
VAVVVITAMV LVQRSRGGKL LHGSRDNEMR MRASGHRVSG YLLLTYIAAG AIAGVGGSVL
ATTQRYVSPS DMDFSVAALI LLAVVIGGAF SITGALAGVL LVIVARDLIG NHLPGQGPLL
LGILFIVAVY LLPNGLAGRL GDLTRLLTRK RDREEAT