Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_2840 |
Symbol | |
ID | 8884038 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | + |
Start bp | 2988460 |
End bp | 2989704 |
Gene Length | 1245 bp |
Protein Length | 414 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003511609 |
Protein GI | 291300331 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.110654 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCTCCA CATCCATTGC GGCGCAGCGG CAAAGCACCG ACAACCGCAT CGCCGAGCTG GACGCGCTGC GCGGCTTCGC GCTGCTGGGC ATCCTGATCG CCAACGTCGT CGCCGTCGCC GCACTGCTGA CGATCGTCGG TTCCGGCGAG AACCTGAAGC TCATATTCGA CGCCCCGATC GACCGGGCCG TCACCGGCAC GGTCACCGCA CTGTTCCTGG GCAAGTTCTA CCTGCTGTTC TCGTTCCTGT TCGGATACTC GTTCACGCTC CAGATCACCG CCGCCGAACG GGTCGGCGTC TCGGCCAGGG CCAGGCTCTT GCGCCGCTGC GCCGCGCTGT TCCTCATCGG ACTGGCGCAC GTGTTCCTGC TGTGGTTCGG GGACATCCTG ACCCTGTACG CGGTCCTGTG CCTGGTGCTC ATCGCCATGC GCCGGGTCCG GCCGATCACT GCCGTGATCA CCGGATGCGT CCTCTACCTG GCCTTCGCGT CCCTGTTCCT CCTGGGCGGC GACGAAAGCG GCGGCGATGA CCTTCCGTTC CTGCAAGCCC AGACGTTCCA CGACGCCTAC ACCGGCAGCG CCGCTGACAC CTTCGCCGCC CAGCTGGCGA TCGCGCCGTC CTTCATCGGA TTCATCTGGC TGGCCCAGGG AGTCACCGCG CTCGCGCTGT TCCTGTTGGG CATGGCCGCC GGAAAACGGC GCCTGTTCGA ACGCCGGGAC ACCATCCGCC GCTGGTCGCC GTGGGTGATG TGGATCGGTC TCGGCGTCGG TCTGCCGGTG GCCGCCGCGA CGCTGGCCGC CGAGATGGGT TGGATCGAGA TGTCCAGCGC ACTGGAAGGC ATTCAGTTCC TGGTCAACCC ACTGATGACC TTCGCGTACA TCGCCGTCCT GCTGCGCCTG GCCGCCGGAA AGCACACCTC GCGACTGGTC GCCTGGCTCG CCCCCGCCGG ACGCATGGCC GCCTCCAACT ACATCGGACA GTCCGTGGTC TTCATGCTGA TCTACACCGG CTACGGTCTG GCCCTTGTCG ACGACATCCC CCCGGCCGGG CTGATCGGCA TCGCGCTGTT GACCTTCACC GCACAACTGG CCGCGAGCGC CTGGTGGATG CGCCGCTTCG CCTACGGCCC GGTCGAAGGA CTACTGCGGG CGGCCACCAA CTGGACCGCC CCGACCTGGC GCCGCCGGAC CAGAACCCAC GACGCCGCTG CCGCGCCATG CGCGACCGCG AACCCGAGGG ACTAG
|
Protein sequence | MTSTSIAAQR QSTDNRIAEL DALRGFALLG ILIANVVAVA ALLTIVGSGE NLKLIFDAPI DRAVTGTVTA LFLGKFYLLF SFLFGYSFTL QITAAERVGV SARARLLRRC AALFLIGLAH VFLLWFGDIL TLYAVLCLVL IAMRRVRPIT AVITGCVLYL AFASLFLLGG DESGGDDLPF LQAQTFHDAY TGSAADTFAA QLAIAPSFIG FIWLAQGVTA LALFLLGMAA GKRRLFERRD TIRRWSPWVM WIGLGVGLPV AAATLAAEMG WIEMSSALEG IQFLVNPLMT FAYIAVLLRL AAGKHTSRLV AWLAPAGRMA ASNYIGQSVV FMLIYTGYGL ALVDDIPPAG LIGIALLTFT AQLAASAWWM RRFAYGPVEG LLRAATNWTA PTWRRRTRTH DAAAAPCATA NPRD
|
| |