Gene Snas_2838 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_2838 
Symbol 
ID8884036 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp2986720 
End bp2987286 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content67% 
IMG OID 
Producttranscriptional regulator, LuxR family 
Protein accessionYP_003511607 
Protein GI291300329 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.43909 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.15298 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGGTTC AGGCGAAGGG CACCGGCGAA AGCGAGATGG TGGTGGGCAA ACGCACCTCC 
GAGGACGAAT TCGACGAGTT CGTGCGCGGA AGTTCGCTGC GGCTGTTGCG GTCGGCCTAC
CTGCTGACCG GCGACCAGCA CCTGGCCGAG GACCTGGTGC AGTCGGCGCT GGAACGGACG
CATCGCTCGT GGAAACGCCT GCACCGCACC GAGAGCGCCG AGATGTACAC CCGCAGGGTG
ATGTACCACC TCCAGGTCGC GTGGTGGCGC AGACGGCGGG TGAAGGAACA CTTCGACGAG
CAACCGATCG ACGAGAGGGT CTCCACTCCG GACTCCGCCG AGGACGCGAC CCGGCGGCTG
GTGCTGGGGC AGGCGCTGGC GCAGTTGACG ACCCGGCAGC GTGCCGTCAT CGTCCTGCGG
TTCTACGAGG ACCTCAGTGT CTCGCAGACC GCGGAGATGC TCGGTTGCAG CAACGGGACG
GTGAAGAGCC AGACAGCCAA AGCGTTGGCG GCGCTGCGCC GTCAGCGGCC GGAACTGGCG
CAACTGACCG AAGGGAGTTT CGCGTGA
 
Protein sequence
MTVQAKGTGE SEMVVGKRTS EDEFDEFVRG SSLRLLRSAY LLTGDQHLAE DLVQSALERT 
HRSWKRLHRT ESAEMYTRRV MYHLQVAWWR RRRVKEHFDE QPIDERVSTP DSAEDATRRL
VLGQALAQLT TRQRAVIVLR FYEDLSVSQT AEMLGCSNGT VKSQTAKALA ALRRQRPELA
QLTEGSFA