Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_2838 |
Symbol | |
ID | 8884036 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | - |
Start bp | 2986720 |
End bp | 2987286 |
Gene Length | 567 bp |
Protein Length | 188 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | |
Product | transcriptional regulator, LuxR family |
Protein accession | YP_003511607 |
Protein GI | 291300329 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.43909 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.15298 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACGGTTC AGGCGAAGGG CACCGGCGAA AGCGAGATGG TGGTGGGCAA ACGCACCTCC GAGGACGAAT TCGACGAGTT CGTGCGCGGA AGTTCGCTGC GGCTGTTGCG GTCGGCCTAC CTGCTGACCG GCGACCAGCA CCTGGCCGAG GACCTGGTGC AGTCGGCGCT GGAACGGACG CATCGCTCGT GGAAACGCCT GCACCGCACC GAGAGCGCCG AGATGTACAC CCGCAGGGTG ATGTACCACC TCCAGGTCGC GTGGTGGCGC AGACGGCGGG TGAAGGAACA CTTCGACGAG CAACCGATCG ACGAGAGGGT CTCCACTCCG GACTCCGCCG AGGACGCGAC CCGGCGGCTG GTGCTGGGGC AGGCGCTGGC GCAGTTGACG ACCCGGCAGC GTGCCGTCAT CGTCCTGCGG TTCTACGAGG ACCTCAGTGT CTCGCAGACC GCGGAGATGC TCGGTTGCAG CAACGGGACG GTGAAGAGCC AGACAGCCAA AGCGTTGGCG GCGCTGCGCC GTCAGCGGCC GGAACTGGCG CAACTGACCG AAGGGAGTTT CGCGTGA
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Protein sequence | MTVQAKGTGE SEMVVGKRTS EDEFDEFVRG SSLRLLRSAY LLTGDQHLAE DLVQSALERT HRSWKRLHRT ESAEMYTRRV MYHLQVAWWR RRRVKEHFDE QPIDERVSTP DSAEDATRRL VLGQALAQLT TRQRAVIVLR FYEDLSVSQT AEMLGCSNGT VKSQTAKALA ALRRQRPELA QLTEGSFA
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