Gene Snas_2833 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_2833 
Symbol 
ID8884031 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp2982162 
End bp2982836 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content71% 
IMG OID 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003511602 
Protein GI291300324 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.889648 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCGAGC GGAACAACCT CACGGTCCGC CGTGGACGGC CGCCGGTGAG CGAGCCGGAA 
CGGTGGCGGC AACGCCTCGA AGTCTCCCGC CACGCGGTGC GGCTGTTCCG GGAACACGGG
GTGGCCGCGA CCTCGGGCGA GCAGATCGCC GCCGCCGCCG GGATATCCGA ACGGACACTG
TGGCGCTACT TCCGCACCAA GGAGAGCTGC GTCGAACCGC TGCTGACCAA GACCGTCGAG
TCCTTCCGGG AAGTACTGCG AACCTGGCCG TCCGAAGTGG AACTAGCTGA TCACCTGCGC
GCGGCCTACT CGCCGGTGCC CGACGCGTCC GACCCCGACA TCGACGCCGT CCTGGCCGTG
GTGCGCATGA CCCACGACGA ACCGGTACTG CGCGCCGTCT ACCTGGTGCT GCGCGAACGC
GCCGACGCCA CCCTCGCCGA CGTGCTCGCC GCCCGCACCG GCCAGTCGGC CGACGCGCCC
GAGATCCGGA TGCGCGCCGC CGCCACCGGC GCGGCACTGT GCGCGGCCAC CGACCACCTC
GTGTCCATCA CCGAGGCGGG ACTGACCCCC GAGCACCTGC GCGAACACCG CGAACGCCTC
GCCGACTTCC TCACCTACCT CACCGACGGC CCGAACCGGC CGACCCCCAG CGATGACGGA
GCCGACCATG AATGA
 
Protein sequence
MGERNNLTVR RGRPPVSEPE RWRQRLEVSR HAVRLFREHG VAATSGEQIA AAAGISERTL 
WRYFRTKESC VEPLLTKTVE SFREVLRTWP SEVELADHLR AAYSPVPDAS DPDIDAVLAV
VRMTHDEPVL RAVYLVLRER ADATLADVLA ARTGQSADAP EIRMRAAATG AALCAATDHL
VSITEAGLTP EHLREHRERL ADFLTYLTDG PNRPTPSDDG ADHE