Gene Snas_2822 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_2822 
Symbol 
ID8884020 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp2968586 
End bp2970607 
Gene Length2022 bp 
Protein Length673 aa 
Translation table11 
GC content71% 
IMG OID 
ProductGlycosyl hydrolase family 32 domain-containing protein 
Protein accessionYP_003511591 
Protein GI291300313 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACCA TCCCCAGAAG ACAACTGCTG CGTGGCATGA TCGCCGGTGG CGCGCTGATC 
GGCGGCGTCC CGTTGCTGGT CTCGGCCTCG GCGAACGCCA CCCCCGCCGG GCGGCGGGAG
GCCGGGCCGC GCTGGCTGGG CGCCGGTCCG TTCCAGCACG TGTACGACCC GAGCCCGGAC
CAGGATCACA GGCGCTATCT CAACGACCAC TGCACCATCA AGGGCCCGGA CGGCAAGTGG
CACCTGTTCA GCATCATCGG CGACACCGCC CCACCCGGGC AGGTCCCCGA CTCGGCGGTC
GAGGACCACA TCGCGCACGC CGTCGCGGAC AACCTCGACG GACCGTGGGA GTCCAAGCCG
CACGTGCTGA CCACCGACAC GGGCAAGGGC GAGGACCACC TGTGGGCCCC GCACGTCATC
GAGCACGACG GCACCTACTA CATGTTCTAC TCGGCGGGCG CGCCCAAGGG CGAGCCGTGG
GCGATCAACC TGGCCACATC GAAGAACCTG ACCGACTGGG AGCGCAACGA CAAGAACCCG
CTGTTCCGGT ACGGTGGCGC GGCCCGGGAC CCGATGGTGG TGTGGATCGG CGACGAGTGG
GTCATGTACT ACACCGAGGT CGACGAGCAG CGGCACCACA TCGTCGCGGC CCGCACCTCC
AAGGACCTGC GCGAGGGCTG GAGCGACGCC CGCGCGGTGT GGACCGACGC GATCACCGAC
CACACCGTGT CGGTCACCGA GTCGCCGTTC CTGGTCGAGC GGGACGGCTG GTGGTACCTG
TTCATCGGCA CCCGCAACGG ATACGTCGGC ACCGACGTGT TCGCCAGCCG GGACCCGTTC
GCGTTCACAC TGGACGGATA CGCGGGGCAC ATTCCGGCGC ACTGCGCCGA GATCGTGCGC
GACGGCGAGG ACTGGTGGGT CACCGCCGCG GGCTGGTTCC AGGATGGACT GCACCTGGCG
CCGCTGCACT GGCGCGACAC TCCCCCGTTG TGGCACAGTC CCCGAAATCC CGCCGCCGCC
GTGGACGTCA CCGGCGCGGT GCGGCTGTTC GCGCTGGCCG AGGACCGCTC CACACTGGTC
ACCCGAACCC TGGAGAGCGG CTGGGAGGAG TTCGGCACCG GCTTCGCCAC CGTGCCCACG
ATCGGCGGCA ACGAGGACGG ACGGCTCAGC GTGTTCGCGT TGCGCCCCGA CGCGTCTCTG
GCGGTCCGGA CCCAGACCGG CGACGGCGGC TGGAGCGACT GGCGCGACTT CGGCGGCCCG
TTCGACGCCG CCCCGGTCGC CGCCCTCGAC GCCGACGGCC GGCTGGAGCT GTTCGCGCTT
GGCCAAGCGG GGGAAAGCAT TCAGCGTCGC CGCCAGTCCA CGCCCAACAG CGAGGAATGG
TCCGACTGGG AGCGGTTCGG CGACGGCGCC GGTGCCCCGC CGGTGGTGGC GGCCAACGCC
GACGGCCGGC TGGAGGTGAT CGCGCTTGGC CCGGGCGGCG CCAACATCGC CCACCGCTGG
CAGAACTCCC CCGGCGGCGA CTGGCACGAC TGGGACGGTT CCTTCGGCAC CGCCGCGGGT
GCCGCGCCAA CGGCCGCGCT GGGTGCCGGG GATCGCTTGC AGGTCATGGT GATCGAACCC
ATGGGGCTGT CGCTGAACAA CCGTCCCCAG TCGACGGCCA ACGGCAAGTG GGGCGACTGG
CGGCGGGTCA CGTACTGGAT CGACGCGGGC GCGGCCACGA TGGTGGCGAG CGAGGACGGG
CGGCTGGAGG CGTTCTTCAT GCCGCCGGGC GGCGACGTGA TCTACCACAG TTTCCAGTTG
TCGGACGCGT CCTGGAGCGA GCAGGAGGAG TTCGGCACCG GCCCGGTCAC GGCGACGCCC
ACCGCGTGTC GCGACGGCGA GGGCAAGGTC CACGTGTTCA CCGTCGCCCC CGACGGAACA
GTCCACACGC GAACCCAGAC GGCGGCGAAC AACGGCTGGG GCGAGTGGCG AAAGCTCGAC
GGCGACCCGA TCGCCCCGGT ACCAGCGGGC TCGGCGACCT GA
 
Protein sequence
MTTIPRRQLL RGMIAGGALI GGVPLLVSAS ANATPAGRRE AGPRWLGAGP FQHVYDPSPD 
QDHRRYLNDH CTIKGPDGKW HLFSIIGDTA PPGQVPDSAV EDHIAHAVAD NLDGPWESKP
HVLTTDTGKG EDHLWAPHVI EHDGTYYMFY SAGAPKGEPW AINLATSKNL TDWERNDKNP
LFRYGGAARD PMVVWIGDEW VMYYTEVDEQ RHHIVAARTS KDLREGWSDA RAVWTDAITD
HTVSVTESPF LVERDGWWYL FIGTRNGYVG TDVFASRDPF AFTLDGYAGH IPAHCAEIVR
DGEDWWVTAA GWFQDGLHLA PLHWRDTPPL WHSPRNPAAA VDVTGAVRLF ALAEDRSTLV
TRTLESGWEE FGTGFATVPT IGGNEDGRLS VFALRPDASL AVRTQTGDGG WSDWRDFGGP
FDAAPVAALD ADGRLELFAL GQAGESIQRR RQSTPNSEEW SDWERFGDGA GAPPVVAANA
DGRLEVIALG PGGANIAHRW QNSPGGDWHD WDGSFGTAAG AAPTAALGAG DRLQVMVIEP
MGLSLNNRPQ STANGKWGDW RRVTYWIDAG AATMVASEDG RLEAFFMPPG GDVIYHSFQL
SDASWSEQEE FGTGPVTATP TACRDGEGKV HVFTVAPDGT VHTRTQTAAN NGWGEWRKLD
GDPIAPVPAG SAT