Gene Snas_2819 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_2819 
Symbol 
ID8884017 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp2965130 
End bp2966179 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content65% 
IMG OID 
Productperiplasmic binding protein 
Protein accessionYP_003511588 
Protein GI291300310 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCACGG TTTCCCGGCC CCCGCGTCGT CCGGCGCGTC CACTGCTCGC GCTGTTGGCC 
ATCGTCCTGA CCGTGTCCAC GTTGAGCGCC TGCGGGCTGC TGTCCGAGGA CTCCGGCGCC
GACGGCTCCG AGTCCGGCTC GTTCCCGGTC ACGATCGACC ACGCCCTGGG CGAGGCGAAG
ATCGAGAAGA AGCCCAAGCG CGTCGTCACC ATCGGCTGGC TGTCCCAGGA CGTGGTTGCC
GCGCTGGGCA CGGTACCGGT GGGCGTCACC GACTTCAGCT GGGGCAGCGT CGACAAGTAC
CTGCCTTGGT TCGCCGAACG GGTGAAGGAA CTCGACGGGG AAATGCCGGA GCTCATCGAG
GTCAACGACT CCGACGAGGC CTCGGCCGAG CAGATCCTCG ACCTGGACCC GGATCTGATC
GTGGCCGCGC ACTCCGGGAT CACCGACTCC AACTACAAGA AGCTGTCGTC GATCGCCCCG
ACCATCGCCT ACGACAAGAA ACCGTGGCAG TCGGACTGGA AGGACGTCAC CCTCACCGTC
GGAACCGCGA TGGGACAGAA GAAACAGGCC CAGAAGCTGC TCGACGAGAC CGAGAAACTC
ATCGCCGACA CCGCCGAGGA CAACCCGAAG TTCACCAAGA CCAGCTTCGC CTACGGCTGG
TACCTGGAGG AGGGTTCCAC CGAACTGCCG TTGTACGTCA GCGCCGACCC ACGGGTGCAG
TTCGTGCAGC AGCTCGGGTT CAAGCTGTCG CCGCAGGTCG CCGACAAGGA GTCGGATCCG
GGGACCTTCA CGGCCAGCTT CAGTCTGGAG GAGGTCGACA CCATCAAGGC CGACGTCTAC
ATCGGATGGG TCGACAACAA GAAGGACCTC AACCGCACCG TCGACAATGC CGTGTTGAAG
AAGTGGAAGC CGTTCGCCTC CGACTCGTAC TACATCATGG AGGACCAGGC GGTGGCCTGG
GCGAGCTCGG CGCCGTCAGT CCTGGGTATC CCGTGGGCCA TGGACGACAT CGTCGCGGGC
CTTGACAAGG CGGTCGCGGG GAAGGCATGA
 
Protein sequence
MSTVSRPPRR PARPLLALLA IVLTVSTLSA CGLLSEDSGA DGSESGSFPV TIDHALGEAK 
IEKKPKRVVT IGWLSQDVVA ALGTVPVGVT DFSWGSVDKY LPWFAERVKE LDGEMPELIE
VNDSDEASAE QILDLDPDLI VAAHSGITDS NYKKLSSIAP TIAYDKKPWQ SDWKDVTLTV
GTAMGQKKQA QKLLDETEKL IADTAEDNPK FTKTSFAYGW YLEEGSTELP LYVSADPRVQ
FVQQLGFKLS PQVADKESDP GTFTASFSLE EVDTIKADVY IGWVDNKKDL NRTVDNAVLK
KWKPFASDSY YIMEDQAVAW ASSAPSVLGI PWAMDDIVAG LDKAVAGKA