Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_2802 |
Symbol | |
ID | 8884000 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | - |
Start bp | 2950476 |
End bp | 2951384 |
Gene Length | 909 bp |
Protein Length | 302 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | |
Product | DNA polymerase LigD, polymerase domain-containing protein |
Protein accession | YP_003511571 |
Protein GI | 291300293 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0918963 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCACGTG AGCACAGGAC GATCACCGTG GACGGTTACG ACATCGAGGT GACCAATCCC GAAAAGGTGA TGTATCCCGA CAGTCGGTTC ACCAAACAGG ACGTCGTCGA CTATTACCTG AAGGTCGCCT CGGTTTTGTT GCCGCACATC AGGAATCGGC CGTTGACGCG GATCCGGTTC CCCGATGGGA CCGGGGGTGA GTCGTTCTTC GAGAAGAACG CTCAGAAGTA CACGCCGAGT TGGATTCGGA CCGAGACGGT TGCCACGCCG GGTTCGACGA AGGGGCGGGC TTCGGTTGAC TACATCGTGG CCGAGAAGCC CGCGACGTTG GCTTGGCTCG CGAATCAGGC CGCGTTGGAG TTGCATGTTC CGCAGTGGCG GTTCGACGGG CATGAGGCGA GTGATCGGCC CGATCGGTTG GTTGCCGATT TGGATCCGGG GAAGGGGGCT GGGTTGCGCG AGTGTGTGGA GGTGGCGCAG CTGTTGCGGG AGCGGTTTGA GGCCGACGGG TTGACCGTGT ACGTGAAGGC GTCGGGGAAG AGTGGGGTGC ACCTGTGCTG TCCCATCGCG GGCAGTCAGG GCGATGACGT GGTGTCGGGG TACGCCAAGG CGGTGGCCAA TGATCTGGCG GCTGAGAAGC CGAAGTTGGT GACCGCGAAG ATGGCCAAGG CCGAGCGTGA GGGGCGGGTG TTCATCGACT GGAGCCAGAA CAACGCCGCG AAGACGACGG TCGCCCCGTA TTCGTTGCGC AATCGGGCCG AGGCTACGGT TTCGGCGCCG TTGACGTGGG AGGAGCTGGA CTCCGACAAG CTGACGCCGC CCGGGCCCGA CGAGGTGCTG GAGCGGGTGG CCGAGCAGGG TGACCTGTGG GCCGACGTGT TGAAGAAGGG GCCGAAGGTG CCCGGCTAG
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Protein sequence | MAREHRTITV DGYDIEVTNP EKVMYPDSRF TKQDVVDYYL KVASVLLPHI RNRPLTRIRF PDGTGGESFF EKNAQKYTPS WIRTETVATP GSTKGRASVD YIVAEKPATL AWLANQAALE LHVPQWRFDG HEASDRPDRL VADLDPGKGA GLRECVEVAQ LLRERFEADG LTVYVKASGK SGVHLCCPIA GSQGDDVVSG YAKAVANDLA AEKPKLVTAK MAKAEREGRV FIDWSQNNAA KTTVAPYSLR NRAEATVSAP LTWEELDSDK LTPPGPDEVL ERVAEQGDLW ADVLKKGPKV PG
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