| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_2800 |
|---|
| Symbol | |
|---|
| ID | 8883998 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stackebrandtia nassauensis DSM 44728 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013947 |
|---|
| Strand | + |
|---|
| Start bp | 2947470 |
|---|
| End bp | 2949821 |
|---|
| Gene Length | 2352 bp |
|---|
| Protein Length | 783 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | |
|---|
| Product | putative PAS/PAC sensor protein |
|---|
| Protein accession | YP_003511569 |
|---|
| Protein GI | 291300291 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.336879 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGAAAT CCGAGTCCGG CGTGCCCGAC TCCCTCGAAG CGCTGGCGCA GACCGTCGTG
AAGCTGCGTT CCGAAAGGGA TGGCCTGCGT GAGGCCATGC GCAACCGTGC GGTCATCGAA
CAGGCGAAGG GGATGCTCGC CGAACGGCTC TCCCTCGATC CCGAACAGGC GTTTCGGCAC
ATGATCGAGA TGTCCACGCG CAACAACGTC AAGGTCGCCG AACTGGCGGC GGCCGTGGTG
GCCGGACGGC AGCCCGAACC GGACGAGCCC ACCGAGATCG CCGTCGACAC CGCGCCCCCG
GTCCCGGACG TGATGGACGC GCCCGAGGCG GACTCCCCGC CCATCGACCC CAACGCGCTG
CGCTCCGAGG TGAGCCTGAT CGGTGGCCGC ATCGAGGCCG CCACCAACTT CGACGAGATC
GCCGAGTCGC TGTCGGTGGC CACCTCCGGC TGGCCCGCGC CCGCCAACGT CATCCTGCTG
CTGGTGGAGG GGGACGGCGC GCTGCGCCTC GTGGGCTCGG CCGGACTGTC GCCCACCACC
CGCAGCCAGT GGGACCGGGT CCCGCCCATC GAGAACGTGC CCGTCGTCGC GGCGGTCCAG
AACCGGGCCC CGGTCTACCT GGCCGACCTG GAGGCGGTGT CGCGACAGTT CCCCGTCGTC
GCCGACCGTC CACACGAGGC GCTGGTGGCG ATGCCGCTGA TGAACGGCGA CGAAGTGGTC
GGCGTCCTGG AACTCACCTG GGCCACCTCG CCCACCATGG ACAAACACAC CCGCTCGCAC
CTGCTGTGGC TGGCCGAACC GGCGGCCCGG CAGTGCCACG CGCTGTCCGC CCGGTCGGAG
GCGTTCACCA ACACCTCCAT AAGCGACGAC GCCGTGGACA CCAGCCTGGT CTCGTTGTTC
CTGGAGGCGC TGAGCTTCCC GGCCGTCCTG CTGCAACCGC GCTACGGCGA GAACAACCAG
CTGCTGGACT TCGATCCGGT GTACAGCAAC TCCGCCGCCG CGCCGGTGAC CACCAGGCCC
AACGGCCGTC CGATGAGCCT GATGACCGCG CTGCCCGACT CGGGCGCCCG GCAACTGCTG
CCCGCCTTCG CCGCCACCCT GCGGGGCGGC CAGCCGTGCA TGCTGCGCGA CATCAAGATC
ACCACCATGA GGGACGGACA CCCCCGGATG TTCAACGCCG ACATCCGCGG CACCCGGGTG
TGGGAGAAAC TGCTCGTCAC CTGGCGGGTG GAATCCGAAC CGGCCCGGCA CTTCGGTTCA
CTGCTGAACT CGGAGAAGAC CTTCGGCACC GGCGGGTTCT ACTGGGACCT CGACAACGGC
GAGATCCGCT GGACCCCGGG GATGTACCGG CTGGCGGGCC TCGACCCGGA GAAGGGCACC
CCGCCGGTCG ACACCATCGT GTCGCTGATC CACCCCCGGG ACCAGGAATC CCTGGTCAAA
GAGGCGATGG AGACGCTGAA GGCCGGGCGG GAACTGCGCA AGGAACTGCG CGGCCACGGC
GACCTCGACG GCCGGGTGTT CCGCGTGGTG GCCACCCCCG AACTGACACC CAGCGGCGAG
CTGAAGATCG TGCGCGGCGC CGTCCGCGAG ATCACCACCG ACCGCAGGCT GGGCGACCAG
CTGCGCCGCG AACGGATGTC GGTGGCCGCC GCCCGCGGCG AACGCGACAA CCTGCGCACC
GCCCTCGAAC CGCTGCTGAC ACCGCTGCGA CTGCGCGGTG GTACCGCCGG CGTCGAGATC
TCCGGGCACT CGCTGGGCTG CGGCGCGCAG TCCGCGCGCA GCTGGTACGA CGCCGTGGAC
CTCCCCACCG GCAGAGTCGC CCTGATCGTC GGCGAAGTGC ACGGCGACCA GCCGACCGCG
CCGATGCTGC GACTGCGGCT GTCCACAGCG GCCTTCGCCC TGGCCGGAAT GAACCCCGCC
GAGGCGATGA GCGCGGCCAA CACGGCCTTC ATCGCGACCG TCCCCGACCG CACCGCGACC
ATGACCCTGG CCAGCCTCGA CCCGGCCACG GGCGCCCTCA CCTGGGCGAC CTCCGGCCAG
GCCAGCCCGG TGCTGTCGTT GGCGTCCAAG TCACGCAACC AGGCCACGGG CTCCCTGGGC
CTGCCCATCG GTGCCGACAG TCCACTGGAG TTCCCGCTCA ACCAGGCCGA GATGGAACCC
GGTGACCAGC TGCTGCTGTA CACCGAGGGC CTCCTCATGG GCCCGGGCAA CGGCGGCCCC
CGGATGTTCG AGGCGCTGCG CGAGGCGGCC GCCGCGGCCT CGGCCGAACT GGCCTTCGAG
AAGGTCAGCG ACGCCGAGCC GCGAGTCGCG GAAGCCGAGG CCAGCCTGCT GCTGGTGCGT
CGGGAGTCGT GA
|
|---|
| Protein sequence | MAKSESGVPD SLEALAQTVV KLRSERDGLR EAMRNRAVIE QAKGMLAERL SLDPEQAFRH
MIEMSTRNNV KVAELAAAVV AGRQPEPDEP TEIAVDTAPP VPDVMDAPEA DSPPIDPNAL
RSEVSLIGGR IEAATNFDEI AESLSVATSG WPAPANVILL LVEGDGALRL VGSAGLSPTT
RSQWDRVPPI ENVPVVAAVQ NRAPVYLADL EAVSRQFPVV ADRPHEALVA MPLMNGDEVV
GVLELTWATS PTMDKHTRSH LLWLAEPAAR QCHALSARSE AFTNTSISDD AVDTSLVSLF
LEALSFPAVL LQPRYGENNQ LLDFDPVYSN SAAAPVTTRP NGRPMSLMTA LPDSGARQLL
PAFAATLRGG QPCMLRDIKI TTMRDGHPRM FNADIRGTRV WEKLLVTWRV ESEPARHFGS
LLNSEKTFGT GGFYWDLDNG EIRWTPGMYR LAGLDPEKGT PPVDTIVSLI HPRDQESLVK
EAMETLKAGR ELRKELRGHG DLDGRVFRVV ATPELTPSGE LKIVRGAVRE ITTDRRLGDQ
LRRERMSVAA ARGERDNLRT ALEPLLTPLR LRGGTAGVEI SGHSLGCGAQ SARSWYDAVD
LPTGRVALIV GEVHGDQPTA PMLRLRLSTA AFALAGMNPA EAMSAANTAF IATVPDRTAT
MTLASLDPAT GALTWATSGQ ASPVLSLASK SRNQATGSLG LPIGADSPLE FPLNQAEMEP
GDQLLLYTEG LLMGPGNGGP RMFEALREAA AAASAELAFE KVSDAEPRVA EAEASLLLVR
RES
|
|---|
| |