Gene Snas_2799 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_2799 
Symbol 
ID8883997 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp2946330 
End bp2947133 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content68% 
IMG OID 
ProductRNA polymerase sigma 28 subunit, Sig B/F/G subfamily 
Protein accessionYP_003511568 
Protein GI291300290 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0149065 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCAATG CGACACTTTC CAGAACCCGT ACCCAACCGA CCCCCGCCCG GCGTGAGGAC 
CTGGATCCCC AGGTCAAACC CGTCCTGGAG CGGATGGAAC GACTCAAGAA AACCGATCCC
CGCCGCCGTG CGCTGCGCAA CACCGTGGTG CAACGCGCGC TGCCGCTGGC CGACCGGCTC
GCCCGCCGCT TCGAGCACCG CGGGCAACCG CTGGAGGATC TGACCCAGGT AGCCCGACTG
GGTCTGATCA ACGCGGTCGA CAACTTCAAG TGCGGACGGG GTGGTGGCTT CACCCACTTC
GCCGTACCCA GCATCCTCGG CGAACTCAAA CGCCACTTCC GTGACAAGGG CTGGCTGGTG
CGGGTACCGC GCCGCCTGCA GGAGACCCGG TTGGCGTTCA ACGAGGCGTC CAAGGATCTG
TCCCAGCGGC TCGGCCGCAG TCCCACACTG GAGGACTACG CCGAGTACCT GTCGATGCCG
GTGGAGCAGG TCCGCGCCGG CATCAACTGC GTCGGCGCCT ACGAGGGCGT GTCGCTGCAC
ACACCGGCGC ACCGCGAGTC GTCGGAGGAA CTGATCGACT CGCTCGGTGG CAGTGACCCG
GCCATGGCCT CGGCCGAGGC CCGGATGCTG CTGCGCCCGG CCATCAAGGA ACTGACGCCC
CGCGAGTGCC GGATCCTGTC ACTGCGGTTC GTCGACGACC TGCACCAGTC GGAGATCGCC
CGCGAGGTCG GCCTTTCCCA GATGCACGTC TCACGGCTGC TGCGGCAGAC GCTGACGAAG
CTGCGGGAAC GGCTGGACGC ATGA
 
Protein sequence
MRNATLSRTR TQPTPARRED LDPQVKPVLE RMERLKKTDP RRRALRNTVV QRALPLADRL 
ARRFEHRGQP LEDLTQVARL GLINAVDNFK CGRGGGFTHF AVPSILGELK RHFRDKGWLV
RVPRRLQETR LAFNEASKDL SQRLGRSPTL EDYAEYLSMP VEQVRAGINC VGAYEGVSLH
TPAHRESSEE LIDSLGGSDP AMASAEARML LRPAIKELTP RECRILSLRF VDDLHQSEIA
REVGLSQMHV SRLLRQTLTK LRERLDA