Gene Snas_2790 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_2790 
Symbol 
ID8883988 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp2937696 
End bp2938409 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content68% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003511559 
Protein GI291300281 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0512113 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGGAA AACTTCAACT CGTCGCGCTC GACGCCGCCG ACATCACCGG CCTGTCGCGG 
TTCTACCGGG ACCTGGCGGG GTGGACCGAA GCCGAAGGCG AGGACGGCTG GATCGTGCTC
GACACCCACG ACGGCTGGCA GGTGGCGCTG CAAGAGGTGC CCGACCACAA GCCGCCGCAG
TGGCCGGGCC AGGACCTGCC GCAACAGGCG CACCTGGACC TAAGGGTGCC GGATCTGGAG
GCGGCGTTGG CTCGGGTTCT GGAGCTGGGC GGGACGCTGT TGCAGAAGAA CGAAGCTTGG
TACACCGTCG CCGACCCGGC GGGGCACCCC TTCGATCTGT GCCGGAACGA CGAGGTCACG
AAGCCGACGC TGATGGGCGT GATGCTGGAC GTGCCTGACG CCAAGCAGCT GACCGCGTTC
TACGCGGAGC TGTTGGGCAA GGCGGTGACG TTCGAGGCCG ACGGCATGGG CATGATCGGC
GCGGACGGCG AGCAGCCGGT GCTGTTCCAG CAGGTCGAGG GCTATACGGC TCCGCAGTGG
CCCAACCCTG AGCACCCGCA GCAGGTTCAC ATGGACGTCG AGGTGGGCGA CTTGGACGCG
GCCGAGAAGG CCGTCCTGGG ACTGGGAGCC ACGAGGCTTG AGGGCGGGGG CGAGACGTTC
CGCGTCTTCG CCGACCCGGC CGGGAAGCCG TTCTGCCTGG TGACCAGCAG CTAG
 
Protein sequence
MIGKLQLVAL DAADITGLSR FYRDLAGWTE AEGEDGWIVL DTHDGWQVAL QEVPDHKPPQ 
WPGQDLPQQA HLDLRVPDLE AALARVLELG GTLLQKNEAW YTVADPAGHP FDLCRNDEVT
KPTLMGVMLD VPDAKQLTAF YAELLGKAVT FEADGMGMIG ADGEQPVLFQ QVEGYTAPQW
PNPEHPQQVH MDVEVGDLDA AEKAVLGLGA TRLEGGGETF RVFADPAGKP FCLVTSS