| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_2714 |
|---|
| Symbol | |
|---|
| ID | 8883912 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stackebrandtia nassauensis DSM 44728 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013947 |
|---|
| Strand | - |
|---|
| Start bp | 2853414 |
|---|
| End bp | 2854286 |
|---|
| Gene Length | 873 bp |
|---|
| Protein Length | 290 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | |
|---|
| Product | transcriptional regulator, AraC family |
|---|
| Protein accession | YP_003511483 |
|---|
| Protein GI | 291300205 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.50523 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.456872 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTGCTC CCACCCTGGA TACCGAACGC CCTGATCCCG TTGAGCTGCA CCGGTTGTGC
GTACCCGACC CCGAACGGGT GCCCATGGCC ATCGGCAGCT TCGACTCGAT CGGCCCGCTG
TCGCGCGCCG ACTTCCCGCA CCGGCACACC TTCTATGAAC TGGTCCTGGT CACCGCCGGA
ACCGGCTGGC ACGTCGTCGA CTTCGCCGCC CACCCGATCC GGCCACCGCA CCTGGGTTTC
ATCGCGCCCG GGCAGGTGCA CTGGTGGCGC GACGCGGTCG GCCTCGACGG CCAGGTACTG
CTGTTCACCG ACGAGTTCCT GCTGGCCCAC CCGCGCGACC GCGAGGTCTG GCAGGCACTG
GGACGCCGCC CCTGGCTGAA CCTCACCGGC TTCGAACGCC GCGAGTTCGC CGCGCTGTTC
GCTCAGCTCA GCGCCGAGTA CCGGCGCCGC GACGCGGGAT TCCTGTCGGT GCTTCAGTCC
TATCTGCACG TCCTGTTGGT GCGTGCCTGC CGGGTCGCCG ACGGCATGGC CCTGACGATG
GCGACCGACC GGCCCGCCGC GGTGGTCCGC GAGTTCAACC GGCTGGTCAC CCACTCGGGC
TGGAGCGGGT ACTCGGTGCG CGACTACGCC ACCCGGCTGG GCGTATCGGT CGGCTATCTG
ACCGAAGTGG TCAAACAGGT CCGGGGCGTC ACACCCGGCC AGCTGGTGCG GCGCGCCCGG
GTGCTGGAGG CCCGGCGACT GCTGGGCGGT TCCGACCTGA CCATCGCCCA GGTGTCGCAC
GCGCTGGGTT TCAGCGATCC GGCCTACTTC TGCCGGTTCT TCCGCCGCGA GACCGGATCG
ACCCCGGGCA GCTTCCGGCG CTCCGTCGAC TGA
|
|---|
| Protein sequence | MRAPTLDTER PDPVELHRLC VPDPERVPMA IGSFDSIGPL SRADFPHRHT FYELVLVTAG
TGWHVVDFAA HPIRPPHLGF IAPGQVHWWR DAVGLDGQVL LFTDEFLLAH PRDREVWQAL
GRRPWLNLTG FERREFAALF AQLSAEYRRR DAGFLSVLQS YLHVLLVRAC RVADGMALTM
ATDRPAAVVR EFNRLVTHSG WSGYSVRDYA TRLGVSVGYL TEVVKQVRGV TPGQLVRRAR
VLEARRLLGG SDLTIAQVSH ALGFSDPAYF CRFFRRETGS TPGSFRRSVD
|
|---|
| |