Gene Snas_2713 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_2713 
Symbol 
ID8883911 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp2852501 
End bp2853316 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content70% 
IMG OID 
Productintradiol ring-cleavage dioxygenase 
Protein accessionYP_003511482 
Protein GI291300204 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.655559 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.447309 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGGCA ATCCCGAATC GCCCGACGAA CGCCCCGGCG ACGCCGAACC GCGCCGGGGC 
ATCACCCGCA AACACCTGCT CAACACGGCG GCGGTCGCGG TGCCCGCCTC GTTCCTGGTC
GGCGCCGCCC CCGCCCAGGC CGACAGCGAC CAGTCCGGCA AGCGGCTGTC CCCCACCCCC
TCGTGCGACG ACGGCGACGA CCCGACCCCG CCGCAGACCG AGGGACCGTA CTTCAAACCC
AACTCGCCCG AACGCACCAC GATGCTCGAC GGGCCCGGCA CCCGGCTGGT GCTCACCGGG
ATCGCCTTCG GGCTCGACTG TCAGCGACTG CCCGACGTCC TGCTCGACTT CTGGATGGCC
GACACGTACG GCCAGTACGA CAACGTGACC TATCGGTTCC GCGGCCACCA GTACACCGCC
GGGGACGGCT CGTTCACTCT CACCACGATC GTCCCCGGCC TGTATCCCGG TCGCACCAGG
CATATCCACG TCAAGGCGCA GGCGCCCGGC AAACCCGTCC TCACCACCCA GCTGTACTTC
CCCGGCGAAC CGGGCAACAA CACCGACCCG ATCTTCGACG CCCGGCTGCT GATGGACGTG
CGCACCGTCG GCAGCGGCAA GGAGGCGAGC TTCGAGTTCG TCCTCAATGT CGACGGCGGC
CCCGGCGAAC CCGGCGGCAC CTGGCGTTCG GGGACCTCCT ACAAGGCCGG TGACAAGGTC
ACCTACAACG GCACCCAGTA CCAGTGCCAG ATCGCCCACA CCGCCCAGCC CGGCTGGGAA
CCACCGTCGA CACCCGCGTT GTGGCGCCGG GTCTGA
 
Protein sequence
MTGNPESPDE RPGDAEPRRG ITRKHLLNTA AVAVPASFLV GAAPAQADSD QSGKRLSPTP 
SCDDGDDPTP PQTEGPYFKP NSPERTTMLD GPGTRLVLTG IAFGLDCQRL PDVLLDFWMA
DTYGQYDNVT YRFRGHQYTA GDGSFTLTTI VPGLYPGRTR HIHVKAQAPG KPVLTTQLYF
PGEPGNNTDP IFDARLLMDV RTVGSGKEAS FEFVLNVDGG PGEPGGTWRS GTSYKAGDKV
TYNGTQYQCQ IAHTAQPGWE PPSTPALWRR V