| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_2708 |
|---|
| Symbol | |
|---|
| ID | 8883906 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stackebrandtia nassauensis DSM 44728 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013947 |
|---|
| Strand | - |
|---|
| Start bp | 2846839 |
|---|
| End bp | 2848383 |
|---|
| Gene Length | 1545 bp |
|---|
| Protein Length | 514 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | |
|---|
| Product | cellulose-binding family II |
|---|
| Protein accession | YP_003511477 |
|---|
| Protein GI | 291300199 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.494794 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGAACAT CATCGCGTCT GGCGGCGCTA CTCGTGCTCG CCCTCCTCAC CTCCTTCGCC
CTGGCGGCCC CGGCCCACGC CGCCGCGACC ACCGCGTCCT TCACCAAGAC CTCCGACTGG
GGTTCGGGTT ACGAAGGCAA GATCACCATC AACAACGCGT CCTCCTCGGC CATCGACGGC
TGGAAGGTCG AGTTCGACCT GTCGTCCGGT TCCTCGGTCG GCACCTACTG GGACGCCCTG
CACACCAAGT CCGGCGACCG CAACACCTTC ACCCACCGCG AGTACAACCG CAACATCGCC
GCGGGTGCCA CGGTCAGCTT CGGCTTCATC GTCAGCGGCA CGGCGACCCC GACCAACTGC
ACCATCAACG GCGCCTCCTG TGGCGGAGGC GGCGATCCCG GCGCGCCCAG CGCCCCCACC
GGGCTGCGGT CGACCGGCAC CACCAACTCC TCGATCAGTC TGTCGTGGAC GGCCTCCGGC
GGCAGCGTCA CCGGTTACCG CGTCTACGAG GGCGGTTCCG TGAAGACCAC GGTCTCGGGC
ACCTCCGCGA CCATCTCGGG ACTGGCCACC TGCTCGTCGC ACACCTACAC CGTCGCGGCC
TACAACGGCT CGGGCGAATC GGCCAAGAGC GCACCCGTCA GCGCCACCAC CAGCGGCTGC
ACCGGCGGCG GGACCATGAA GGCCGCGCCG TACCTCTACA TGGGATGGGG CAACCCGCCC
AGCCCGTCGA CGGTCATGAA CGCCACCGGC ATCAAGTACT TCACGATGGC GTTCATCCTG
TCCTCCGGTG GCTGCAACCC GGCCTGGGAC GGACAGCGGC CGTTGCAGGG CAGCGCCGAC
GCGACCGCGA TCTCGCAGAT CAAGGCCGCC GGTGGCGACA TCATCCCGTC CATCGGCGGT
TGGAGCGGCA ACAAGCTGGG GCCCAACTGT TCCAGCGCCG AAGCGCTCGC CGGGGCCTAC
CAGAAGGTGA TCGACGCCTA CAACCTCAAG GCCATCGACG TCGACATCGA GAACACCGAC
GAGTTCGAGA ACGCCACGGT GCAGGACCGC ATCCTGGGCG CGCTGAAGAT CGTCAAGCAG
AACAACCCCG GGATCAAGAC GATCCTGACC TTCGGCACCA CCACCAGCGG ACCCAACAGC
TGGGGCAACC GGCTGATCCA GCGAGCCGCC GAACTCAACG CCAATGTGGA CGTGTTCACC
ATCATGCCGT TCGACTTCAA CGGCGGCGCG AACATGTACC AGAACACCGT CAACGCCTCC
GAGGGACTGA AGAACTCGCT CAAGACCTCC TTCGGCTGGT CCGACTCGGT GGCGTACTCG
CGGATGGGGA TCTCGGGCAT GAACGGCCTG TCCGACCAGC AGGAGCTCAC CAGCCCCAGC
ACCTGGAACC AGATCACCCA GTGGGCCAAG TCCAAGGGCC TGTCGCGGCT GGCGTTCTGG
GCGGTCAACC GGGACCGGCC GTGCCCGGGC GGCGGCGTGG TGTCGCACTG CAGCGGCATC
GACCAGCAGC AGTGGGAGTT CACCAAGATC ACCGCGGGGT TCTGA
|
|---|
| Protein sequence | MRTSSRLAAL LVLALLTSFA LAAPAHAAAT TASFTKTSDW GSGYEGKITI NNASSSAIDG
WKVEFDLSSG SSVGTYWDAL HTKSGDRNTF THREYNRNIA AGATVSFGFI VSGTATPTNC
TINGASCGGG GDPGAPSAPT GLRSTGTTNS SISLSWTASG GSVTGYRVYE GGSVKTTVSG
TSATISGLAT CSSHTYTVAA YNGSGESAKS APVSATTSGC TGGGTMKAAP YLYMGWGNPP
SPSTVMNATG IKYFTMAFIL SSGGCNPAWD GQRPLQGSAD ATAISQIKAA GGDIIPSIGG
WSGNKLGPNC SSAEALAGAY QKVIDAYNLK AIDVDIENTD EFENATVQDR ILGALKIVKQ
NNPGIKTILT FGTTTSGPNS WGNRLIQRAA ELNANVDVFT IMPFDFNGGA NMYQNTVNAS
EGLKNSLKTS FGWSDSVAYS RMGISGMNGL SDQQELTSPS TWNQITQWAK SKGLSRLAFW
AVNRDRPCPG GGVVSHCSGI DQQQWEFTKI TAGF
|
|---|
| |