| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_2700 |
|---|
| Symbol | |
|---|
| ID | 8883898 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stackebrandtia nassauensis DSM 44728 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013947 |
|---|
| Strand | - |
|---|
| Start bp | 2840994 |
|---|
| End bp | 2842421 |
|---|
| Gene Length | 1428 bp |
|---|
| Protein Length | 475 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | |
|---|
| Product | transcriptional regulator, GntR family with aminotransferase domain-containing protein |
|---|
| Protein accession | YP_003511470 |
|---|
| Protein GI | 291300192 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.0691632 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCGCA CCCTCACCGC CGCCCGGGTC ACCACACTCG TGGGCGACTT CGACCGTTCC
CCGGCGTACC TCGGCCTGGC CGACGCGCTG CGACTGCTGA TCGGCGACGG CCGGATCCCG
CTCGACACCA GGCTTCCCAG CGAACGTGAA CTCACCGGAG CGCTGGGTGT CTCGCGCACC
ACCGTGACCC GCGCCTACGC CGAGCTTCGC TCCAGCGGCT ACGCGGCGGC CCGGCACGGC
TCGGGGACTT ACACCCGGCT GCCCGGCGGC CGGGCCCGGA TCCGGGACAA CGCGCTGCTG
CCCTACGCCG GGGACGAGAA CGCCATCGAT CTCAACTGCG CCGCGGGTTC GGCACCGCCG
GGAGTGGCCA CCGCCTACGC CGAGGCGGCG GCCGAGCTGC CCGCCCACCT GGCCGGACAC
GGCTACTTCC CCGCCGGGCT ACCGCGACTG CAGGCCAGCA TCGCCGCGAC CTTCGACGCC
CGGGGCCTGC CGACCCGGCC CGACCAGATC ATGGTGACCC CCGGGGCGTT GACGGCGACG
GCGATCGTGG CCAAGGCGTT CACCGGCCCT CGCGACCGGG CCCTGATCGA GAGCCCGGTG
TACCCCAACG CCACCCAGGC GATCCGCAAC TCCGGCGTCC GGCTCGTCCC CTCCCCCGTC
GACCCGGAGG GGTGGGACCT CGACGCCATC GGCGAACTGC TGCGGCAGAC CCGGCCGACC
CTGGCCTACC TGATCCCGGA CTTCCAGAAC CCGACCGGTC GGCTGATGAG TGCCGAGGAC
CGGGAACGGT ACGCCGCCCA CCTGCGCGGC TCGGGCACCC TGGCGGTGGT GGACGAGGCG
CACCAGTTCC TGGCCCTCGA CGGTCAGGAG ATGCCGCCGC CGTTCGCGGT CTACGCCCCC
GGCACGGTCA CCATCGGCTC GGCGAGCAAG TCGTTCTGGG GTGGACTGCG GCTCGGCTGG
ATCCGCGCGG CCGACTCGGC CCAGATGCTG GCCTTCACCC GGGCCCGGGT CGGTCTGGAC
CTGGGAGCCC CGGTACTGGA ACAGCTGGCC CTGGTCCAGC TGCTGCGCGA TCCCGAACCG
GTGCTGACCG CGCACCGGGA TCGACTGCGC CAGCAACGGA ACCGGCTGCT GGCGGCCCTG
GCCGAGCACC TGCCCGACTG GCGGTTCGTC CGCCCGGGCG GCGGGTTGTC GGTGTGGTGC
CAGCTACCCG AACGCGGCGC CACCGCGCTG GCGGCCGAAG CCGAACAGCG CGGTGTACTG
CTGGCGCCGG GACCGATCTT CGCCGCCGAG GGCGGGCTCG ACCGGTTCAT CCGGATTCCC
TGGACGGCCC CCGCGGATCT GCTCGAGGAA GCGATCCGTC GCCTGGCCGA GGCGTGGAAG
GTCGTCGACG CGGCCCCGAC ACCTCGACCC CGCCTTGTGG TGGCGTGA
|
|---|
| Protein sequence | MSRTLTAARV TTLVGDFDRS PAYLGLADAL RLLIGDGRIP LDTRLPSERE LTGALGVSRT
TVTRAYAELR SSGYAAARHG SGTYTRLPGG RARIRDNALL PYAGDENAID LNCAAGSAPP
GVATAYAEAA AELPAHLAGH GYFPAGLPRL QASIAATFDA RGLPTRPDQI MVTPGALTAT
AIVAKAFTGP RDRALIESPV YPNATQAIRN SGVRLVPSPV DPEGWDLDAI GELLRQTRPT
LAYLIPDFQN PTGRLMSAED RERYAAHLRG SGTLAVVDEA HQFLALDGQE MPPPFAVYAP
GTVTIGSASK SFWGGLRLGW IRAADSAQML AFTRARVGLD LGAPVLEQLA LVQLLRDPEP
VLTAHRDRLR QQRNRLLAAL AEHLPDWRFV RPGGGLSVWC QLPERGATAL AAEAEQRGVL
LAPGPIFAAE GGLDRFIRIP WTAPADLLEE AIRRLAEAWK VVDAAPTPRP RLVVA
|
|---|
| |