Gene Snas_2675 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_2675 
Symbol 
ID8883873 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp2815156 
End bp2816460 
Gene Length1305 bp 
Protein Length434 aa 
Translation table11 
GC content68% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003511445 
Protein GI291300167 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.397563 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACATT CGCAACTGCC GCAAGAGAAA GCAGCTCCGC AGGAGCGCGC GTCGCTCTCG 
CCTCTGAACC CCGGCACGTC CGACGACCCC GCTCCGACCG CTCCCCCTGC GAAAGGGGAC
GCGTCGATGG GACGCCTCGT CGGCGTGGAC CTGGCTCGGG CGCTGGCCGT GTTCGGCATG
TACATCGTGC ACGTCGGGCC GATGCTGTCG ACCACGAGCG GCGTCGGCAG TTGGATCCGG
TACCTGGCCG ACGGGCATTC GTCGGTCCTG TTCGCGACCC TCGCGGGCTT CTCGTTGATG
CTCATCGCCG GCCGCAAGGA ACCGAAGACC GGCCTGGCCG GACGGAAGGC GAAGGCGCGC
ATCGCGATCC GCGCGGTCGT CCTGCTCGCC TTCGGCACGC TCTTGGCGAA GTTCTACGGC
GACGTCATCA TCATCGGCTT CTACGGGGTC TACTTCCTCG TCGCCATGCT GTTCCTCAAG
CTGAGCGGAA AGACGCTCGC GATCACCGCG GCCGCGCTCG CGATCGTCGG GCCGCAGCTG
AAGTTCGTGC TGAGCCCACT GCTGAGCGGC TCGGTCACGC AGACCGTCGA CGCGTACGAC
CCGCTGGAGA AACTCAGCGG CGTGGGCGTG ATCGACCTGT TGATCACCGG CTTCTACCCG
ACGATCCCCT GGATCGCTTT CGTGGTCGCC GGTATGGCCC TGGGACGCGT CGACCTGTCC
GCCCCCGCCA ACCAGCGGCG CCTGGCCGCA CTCGGCGCCG GGCTCACCGT GGCAGCGTAC
GGCCTGTCGC TGCTGCTGGC CGGCAAGAAC GCGCTGCGAA GCATGGCGGA GGACGGGTCG
TCCTCCGGCT CGGGGTCCTG GTCGGGTTCG GGTTCTGGCT CGTGGTCGGG CTCGTCGAAG
CCGCCGATGG ACAGCGGGTC GTTCGGCTAC CAGCCTTCGG TCAGCGACCT CTTTGCCGCC
GGGCCGCACA GCGGCACCAC GTTCGACATC ATCGGCAGCG TCGGCATCGC CGTTCTGGTG
ATCGTGGGGG CCACGTTCCT GATGGACCGC CTGCCGCGCC TGCGCCGCCT GATGGCCCCG
GTCGTCGCGG TCGGCACGAT GTCCCTGACC GCCTATGTCG GCCACTTCGT CATCATGTCG
TGGCTCTCCC TGCCCGGCGG CGGCGTCCGC GGATCCTGGA TCCCGGTGCT CACGCTCATC
CTCGGAGCGA TCGTCTTCGC CGCGATCTGG TCCCGCTTCT TCAAACGCGG CCCGCTCGAG
TACCTGCTCA ACCTCACCAC CAAACCGGCC AAGTACGTCA AGTGA
 
Protein sequence
MTHSQLPQEK AAPQERASLS PLNPGTSDDP APTAPPAKGD ASMGRLVGVD LARALAVFGM 
YIVHVGPMLS TTSGVGSWIR YLADGHSSVL FATLAGFSLM LIAGRKEPKT GLAGRKAKAR
IAIRAVVLLA FGTLLAKFYG DVIIIGFYGV YFLVAMLFLK LSGKTLAITA AALAIVGPQL
KFVLSPLLSG SVTQTVDAYD PLEKLSGVGV IDLLITGFYP TIPWIAFVVA GMALGRVDLS
APANQRRLAA LGAGLTVAAY GLSLLLAGKN ALRSMAEDGS SSGSGSWSGS GSGSWSGSSK
PPMDSGSFGY QPSVSDLFAA GPHSGTTFDI IGSVGIAVLV IVGATFLMDR LPRLRRLMAP
VVAVGTMSLT AYVGHFVIMS WLSLPGGGVR GSWIPVLTLI LGAIVFAAIW SRFFKRGPLE
YLLNLTTKPA KYVK