Gene Snas_2650 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_2650 
Symbol 
ID8883845 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp2786345 
End bp2787331 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content72% 
IMG OID 
Product3-carboxymuconate cyclase 
Protein accessionYP_003511420 
Protein GI291300142 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.547089 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTTTGA TCCTGGGCAG CCACACCGCC GTCGGCGTGG CCGACACGGC CACCGGCGCC 
GTCACCGCGC GCCGCGAACT ACTGCAACCG ACCTTCGTCG CCGCCGCGTC GGACCGCTCG
TGGCTGTACG CGGTCAGCGA GGACCCCGAC GGCCCCGGCA AGCTGCTGGC CCTGCGCCAC
AACGGTTCCG ACCTCGACGG CGAGATCGTC GCGCGCCTCA GCGGCGACAC CGGCCCGTGC
CACGTCAGCC TCCACCCCGA CGGCCGCCAC GCGCTCGTGT CGCACTACAC CGGCGGCAGC
CTCGGCGTGG TCCCACTGGC CGCCGACGGA ACCCCCGGTA TCGGGGCCAG CGTCGTCCGC
CACTCCGGTA CCGGCCCGGA CCCGCAGCGC CAGGAGGGCC CACACGCTCA CCAGGCCGTC
ACTGACCCCA GCGGACAGTG GATTGTGGCC TGTGACCTCG GCGCCGACGA GGTGGTCGTG
TACCGCCTCG ACGAGTACCG ACTCCGCCGC CACTCCGTCG CGGCGTTCCC GCCGGGGCAC
GGCGTACGGC ACCTGGCCTT CGCGCCCGAC GCCCGGCACG CGTACGTCGC CGCCGAACTG
AGCTCCCAAC TGGTGATGTG CGACTGGGAC TCGGGCTCCG GCGTCCTGTC GCCCGGCAAG
TCGATCGACA CCAGCCACGG CCGGGTCCGC AACTATCCCG GCGCCGTCCT CGTGTCGCCC
GACGGCGCGA ACGTCTACGT CACCAACCGG GGCGAGGACT CGATCGCCGT CGTCGACACC
GCCGACTTCA CCCTGCGTGA AACCGTCGAC TGTGGTGGCA TCTGGCCCCG CGACGCCTGC
CTGTCCCCGG ACGGTCAGCG GCTGTACGTC GCCAACGAAC GCTCCGGAAC CGTCACCGGT
TTCGACCTCG ACGACGGCAT CCCGGTACCG TCCGGTCCCG TCATCGGCTT CGACGGCGTC
ACCAGCGTGC TGGCGTTGTC GGACTGA
 
Protein sequence
MRLILGSHTA VGVADTATGA VTARRELLQP TFVAAASDRS WLYAVSEDPD GPGKLLALRH 
NGSDLDGEIV ARLSGDTGPC HVSLHPDGRH ALVSHYTGGS LGVVPLAADG TPGIGASVVR
HSGTGPDPQR QEGPHAHQAV TDPSGQWIVA CDLGADEVVV YRLDEYRLRR HSVAAFPPGH
GVRHLAFAPD ARHAYVAAEL SSQLVMCDWD SGSGVLSPGK SIDTSHGRVR NYPGAVLVSP
DGANVYVTNR GEDSIAVVDT ADFTLRETVD CGGIWPRDAC LSPDGQRLYV ANERSGTVTG
FDLDDGIPVP SGPVIGFDGV TSVLALSD