Gene Snas_2620 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_2620 
Symbol 
ID8883815 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp2752642 
End bp2753688 
Gene Length1047 bp 
Protein Length348 aa 
Translation table11 
GC content70% 
IMG OID 
Productoligopeptide/dipeptide ABC transporter ATPase subunit 
Protein accessionYP_003511391 
Protein GI291300113 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGAGG CCACCCCGGT GCTGCGCATC GACAAACTCA GCGTCGACTA CGGCTACGAC 
TCCCGGGCCG TCCACGCGCT GCGCGAGGTC AGCCTGACCC TCCACTCCGG CGAGGTGCTG
GGGCTGGCGG GCGAGTCCGG CTGCGGCAAG TCCACACTGG CGTACGCGGC CACCCGGCTG
CTGCCGCCAC CGGGCCTGAT CACCGGCGGC CGGGTGCTGT TCTCCACCGC CGACGGCGGC
ACGCTCGACC TGCTGGGGGC CAGCGACGAC GAACTGCGGG CGGTGCGCTG GGAGGAGATC
GCCATCGTCT TCCAGGGCGC CATGAACTCG CTCAACCCGG TGTACCGCAT CGGAAAGCAG
CTCACCGACG TCATCGCCGC GCACCGTCCC AAGACCGGCC GCGCCGCCGC GCGCGACCGA
GCCGTGGAGC TGCTGGACCA CGTCGGCATC TCCGCCGACC GGCTGCGGGC CTACCCGCAC
GAACTGTCCG GCGGCATGCG GCAACGCGTC ATGATCGCGA TGGCGCTGGC GCTGGAACCC
CGCGTCATCA TCATGGACGA ACCCACCACC GCCCTGGACG TGGTGGTGCA GCGGCAGATC
CTGGAACAGA TCACCGAGCT GAAGACCCGG CTGGGTTTCG CGGTCATCTT CATCACCCAC
GACGTGTCCC TTTTGATCGA GATCGCCGAC CGGATCGCGA TCATGTACGC GGGACAGATC
ATTGAGGACG CCACCGCCGC CGAGGTCTAC CACGCGCCGC GCCACCCGTA CACCAGCGGC
CTGCTGCACT CCTTCCCGCC GCTGCACGGC CCCAAACGCC TGCTGGGCGG GATACCGGGT
TCTCCCCCGG ACCTGCAGGC ACTCCCGTCC GGCTGCGCGT TCCAGCCCCG CTGCCAGCTC
GCCTTCGACC GCTGCGGCAC CGACCGTCCG GCACTGTCGG CCACCGCCTT CGGCCCCGAC
GAACCGCTGC GCCGCGTCGC CTGCTTCCAT CACGACGCCG ATCCACCCCT GATTCCCGAC
ACATTGTCGG CCAGATTGGG GTCGTGA
 
Protein sequence
MNEATPVLRI DKLSVDYGYD SRAVHALREV SLTLHSGEVL GLAGESGCGK STLAYAATRL 
LPPPGLITGG RVLFSTADGG TLDLLGASDD ELRAVRWEEI AIVFQGAMNS LNPVYRIGKQ
LTDVIAAHRP KTGRAAARDR AVELLDHVGI SADRLRAYPH ELSGGMRQRV MIAMALALEP
RVIIMDEPTT ALDVVVQRQI LEQITELKTR LGFAVIFITH DVSLLIEIAD RIAIMYAGQI
IEDATAAEVY HAPRHPYTSG LLHSFPPLHG PKRLLGGIPG SPPDLQALPS GCAFQPRCQL
AFDRCGTDRP ALSATAFGPD EPLRRVACFH HDADPPLIPD TLSARLGS