Gene Snas_2598 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_2598 
Symbol 
ID8883793 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp2737389 
End bp2738606 
Gene Length1218 bp 
Protein Length405 aa 
Translation table11 
GC content70% 
IMG OID 
Product3,4-dihydroxy-2-butanone 4-phosphate synthase 
Protein accessionYP_003511370 
Protein GI291300092 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.151345 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.394336 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCATGC TGGATTCCGT CCCCGACGCT ATCGCCGACA TCGCCGCCGG ACGCCCCGTC 
GTGGTCGTCG ACGACGAGGA CCGCGAGAAC GAAGGCGACC TCATCTTCGC CGCCGAGAAG
GCCACCCCGG AACTGCTGGC CTTCATGGTC CGCTACACCT CCGGCTACAT CTGCGCCCCA
CTCACCGAAG CCGACGCCGA CCGGCTCGAA CTGCCGCCCG CCCACACCGT CAACCAGGAC
CCGCGCGGCA CCGCGTACAC GGTCACGGTC GACGCGGGCA GCGGCATCAC CACCGGAATC
TCCGCGGCCG ACCGGGCCCG CACCATCCGG CTGCTGGCCG ACCCGGAAAC CAAACCCACC
GACCTGCGCC GCCCGGGCCA CATGGTCCCG TTGCGCGCCA AGGACGGCGG CGTCTTGCGC
CGTCCGGGCC ACACCGAGGC CGCCATCGAC CTGGCCGTCC TGGCGGGCCT GCGCCCCGCG
GGCGTCCTGT GCGAGATGGT CAACGACGAC GGCACCATGA AGCGCCTGCC CGACCTGCGC
GCGTTCGCCG ACGAACACGA CCTGCGCGTC ATCAGCATCG CCGACCTCGT CGCGCACCGC
CGCCGCACCG AGAAGCAGAT CACCCGGGTC GCCGAAACCC GCCTGCCCAC CGAACACGGC
CAGTTCACCG CCGTGGGCTA CCGCGCCGAC CTCGACGGCT CCGAACACGT CGCCCTGGTG
TGCGGCGACA TCGGCGACGG CACCGACGTC CTGGTGCGAG TCCACTCCGA ATGCCTCACC
GGCGACGCCT TCGGCTCACT GCGCTGCGAC TGCGGCCCGC AACTCCACTC CGCCATGCGC
GCGGTCGCGA CCGAAGGTCG GGGCATCGTC CTCTACATGC GCGGCCACGA AGGCCGGGGC
ATCGGCCTGC TCCACAAACT GCGGGCCTAC GAACTCCAGG ACCAGGGCCG CGACACGGTG
GACGCGAATC TGGACCTGGG TCTGCCCGCC GACTCCCGTG ACTACGGCAC CGGAGCCGAG
ATCCTGGCCG ACCTCGGTGT CAAGTCGATG CGCCTGCTGA CCAACAACCC CGCCAAACGC
GCGGGGATCG AAGGCTTCGG CCTCTCGGTC ACCGGTAGGG TTCCGCTGGC CGGAGCCGTG
CGCCCGGAAA ACCTTGCCTA CCTGCGCACC AAGCGCGACA GGATGGGCCA CCTTCTCGAC
GACCTGGAGA GTGTGTGA
 
Protein sequence
MSMLDSVPDA IADIAAGRPV VVVDDEDREN EGDLIFAAEK ATPELLAFMV RYTSGYICAP 
LTEADADRLE LPPAHTVNQD PRGTAYTVTV DAGSGITTGI SAADRARTIR LLADPETKPT
DLRRPGHMVP LRAKDGGVLR RPGHTEAAID LAVLAGLRPA GVLCEMVNDD GTMKRLPDLR
AFADEHDLRV ISIADLVAHR RRTEKQITRV AETRLPTEHG QFTAVGYRAD LDGSEHVALV
CGDIGDGTDV LVRVHSECLT GDAFGSLRCD CGPQLHSAMR AVATEGRGIV LYMRGHEGRG
IGLLHKLRAY ELQDQGRDTV DANLDLGLPA DSRDYGTGAE ILADLGVKSM RLLTNNPAKR
AGIEGFGLSV TGRVPLAGAV RPENLAYLRT KRDRMGHLLD DLESV