Gene Snas_2586 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_2586 
Symbol 
ID8883781 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp2726084 
End bp2727448 
Gene Length1365 bp 
Protein Length454 aa 
Translation table11 
GC content71% 
IMG OID 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_003511359 
Protein GI291300081 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.159018 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGTCG CCTCCCCTAC CGCCCCACAG ACCCGATCGC GGGCCGTACT GCCGATCGCG 
TGCGCCGCGA TCGTCCCGGT GCTCATGAAC TACACCTCGC CGTTGATCTC ACTGCCGGAG
ACCGCCGCCG GAGTGGGAGC CGGACCGCTC GCGCAGACCT GGATCATGAA CGCCTCTCCC
CTGGGACTGG CCGCCGCGCT GCTGGTGGCC GGGATCCTCG CCGACAACTT CGGACGCCGG
CGGATGCTGT TGGTCGGCGC GCTCGGGATG GGCTTGACCA GTGCGATCGT GGCACTGTCC
ACCGACGCCG CTGTCCTGAT CGGAGCCCGG ATCGGGCAGG GAGTCGCGGG CGCGGCCATC
ATCGCCGCCA GCCTCGGCCT GCTCGGCAGC AACTACACCG ACCCGGCCGA GCGGGGCCGG
GCGACCGGGC TGTGGGCCAT GGCCTTGGGG GCCGGGCTGG CCGTCGGGCC GCTGGCCACC
GGGGCGCTCA CCGAGGCGTG GAGCTGGCGG GCCATCTACT GGGTCTACGC CGCCGTGTCG
ATCGCGCTGG CGGTCGCCGT CACCAGACTG GACGAGTCGC GCGCCGAACA GCGGCGACCG
GTCCACTATG CCGGGATCGT CAGCTTCGTG TCCGGAATGT GCTTCCTGCT GGCGGCGATC
ACGCTGGCCC GCACCGGTTG GACGCGGCTC CCGGTGCTGG TGCTGCTGGG TGCGACGGTG
GTGGCGCTGG CCGGATTCGT GGCACTGTCG CTGCGGCACC ACGCGCCGAT GGTCGACATG
CGACTGTTCC GGCACCGGCC GTTCCTGTTG TCGGTCACCG GTTCCGGCCT CAACGGTCTG
CTCATGATCG GGGTGATGAG CGTGCTGCCC ACCGCGTGGC AGCACACCCA CCACTTCGAC
GCGCTGCACA TGGCGATCCC GTTCACGGTG TACCCGCTGG CGGCGCTGGT CATCGCGCGG
CTGGCGCGAT ACGTGCCGGT GCCGCCGATC CGGCTGCTGG CCATCGGCTA TGGACTGTCG
CTGGCGCAGC TGCTCATGGT GGGTTCGATG ACGAACTGGT CGATGCCGCG GGTGGTGATC
TCGTACCTGA TCGCCGGGAT CGGCGCCGGT TTCGTCAACG CCGCCAACGC CCGGATGGCC
GTCGACAGCG TCCCCTCCGC GAACGCCAGC ATGGGTTCGG GCGCGGCCAA CACCGCCCGC
TACGTCGGTT CGGCGATGGG GGTCGCGATC GGCATCGCCG TGGTCGGCGG GCTGGGCTGG
GCCGACGGCG TCAACTCGGT ACTGATCGGC TCGGCGGTGC TGCTGGGACT GGCGGCGCTC
GGTTACGCGT CCGTCGGCCG GGTCCGTCGC CCCAGCCTCG CCTGA
 
Protein sequence
MAVASPTAPQ TRSRAVLPIA CAAIVPVLMN YTSPLISLPE TAAGVGAGPL AQTWIMNASP 
LGLAAALLVA GILADNFGRR RMLLVGALGM GLTSAIVALS TDAAVLIGAR IGQGVAGAAI
IAASLGLLGS NYTDPAERGR ATGLWAMALG AGLAVGPLAT GALTEAWSWR AIYWVYAAVS
IALAVAVTRL DESRAEQRRP VHYAGIVSFV SGMCFLLAAI TLARTGWTRL PVLVLLGATV
VALAGFVALS LRHHAPMVDM RLFRHRPFLL SVTGSGLNGL LMIGVMSVLP TAWQHTHHFD
ALHMAIPFTV YPLAALVIAR LARYVPVPPI RLLAIGYGLS LAQLLMVGSM TNWSMPRVVI
SYLIAGIGAG FVNAANARMA VDSVPSANAS MGSGAANTAR YVGSAMGVAI GIAVVGGLGW
ADGVNSVLIG SAVLLGLAAL GYASVGRVRR PSLA