Gene Snas_2584 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_2584 
Symbol 
ID8883779 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp2724342 
End bp2725550 
Gene Length1209 bp 
Protein Length402 aa 
Translation table11 
GC content72% 
IMG OID 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_003511357 
Protein GI291300079 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.153183 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAACCA CGCTGACACC GGCACCCACC CGCCCCCGAC GCTCGGCCGC GCTCGGCTGG 
ATCGGCGTCG TGGCCGTGGC GACCGGAACC TTCTCGATCG TCACCACCGA GATGCTGCCG
GTGGGCCTGC TGACACGCAT CGGCCCCGAC CTCGGCGTCT CGGACGGCGC GAGTGGACAG
TTGATGACCA CCGCCTCGTC GATGGCGTTT GTGGCGGCGC TGACGATCGT GCTCGTCGCC
GGACGGCTCG ACCGGCGGTT CGTCCTGGCG GGCATGATGG GCGTGCTGCT GGTCGCCAAC
CTGGTCACCG CGCTGACCGA CAGCTTTGTG GTGCTGCTGG CCGCGCGGGT GATGGTCGGG
ATGGCCATCG GCGGTTTCTG GGCCATCGGC GCCAGCCTCG CGACCCGGCT GGTGCCGGAA
CGGTCCGTTG CCCGGGCCAG CTCGGTGATC TTCAGCGGCG TGTCGATCGC CTCGGTCGCC
GGAGTCCCGG CGGGCATGTT CATCGGCGAC CACGCCGGTT GGCGGGCCGC GTTCCTGGCG
CTGGCCGGAC TGTCGGCGAT CGTGCTCGTC GCGATGCTCA CCCTGCTGCC CGCCCTCCCG
TCGCGACGTT CGCTGCGGCC CCGGGACCTG GCCGTGCTGC TGCGAAACCG TCCCGTCCTG
ATCGGACTGG GCGGGCTGGC GCTGATCGTG ATCGGCCACT TCACCGCTTA CACCTACGTG
ACCCCGGCAC TGAAGGCCGC CGCCGGAATC GACGGCGGCG CCGCCGCGGT CGTCCTGCTG
ATCTACGGCA GCGCGGGCAT CGCCGGGACC TTCGTCGCCG GGGCGCTCAC GGGCGGACAC
CTGCGGGCGG TGTTGTTGAC CAGCGGCGGG TTCATCGTCG CGGCCACCGT CGCGATCCCG
CTGCTCGTGT CCGGCCCCAT CACCGCGACG GTGACGCTGA TCGTGTGGGG CCTGGGCTAC
GGCGCCGTCC CCGTCGGACT TCAGGTGCTG ACGCTGCGAT CGGCACCCGA AGCGCCCGAA
GCGGTCTCGG CGCTGTTCGT GGCCGGGTTC CAGGTCGCGA TCGGACTGGG CGCCGTGTTC
GGGGGAGTGG CGGTCGACCT GTCCGGCCCG CAGGCTCCGA TGTGGGTGGG CGCGATCGCC
GCCGCCGCGA TGGTGGCGCT GGTGTTCGCT GCCGTGCGGC TACCTCACCG GCCCCGGGAC
AGCAGGTAG
 
Protein sequence
MTTTLTPAPT RPRRSAALGW IGVVAVATGT FSIVTTEMLP VGLLTRIGPD LGVSDGASGQ 
LMTTASSMAF VAALTIVLVA GRLDRRFVLA GMMGVLLVAN LVTALTDSFV VLLAARVMVG
MAIGGFWAIG ASLATRLVPE RSVARASSVI FSGVSIASVA GVPAGMFIGD HAGWRAAFLA
LAGLSAIVLV AMLTLLPALP SRRSLRPRDL AVLLRNRPVL IGLGGLALIV IGHFTAYTYV
TPALKAAAGI DGGAAAVVLL IYGSAGIAGT FVAGALTGGH LRAVLLTSGG FIVAATVAIP
LLVSGPITAT VTLIVWGLGY GAVPVGLQVL TLRSAPEAPE AVSALFVAGF QVAIGLGAVF
GGVAVDLSGP QAPMWVGAIA AAAMVALVFA AVRLPHRPRD SR