| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_2580 |
|---|
| Symbol | |
|---|
| ID | 8883775 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stackebrandtia nassauensis DSM 44728 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013947 |
|---|
| Strand | - |
|---|
| Start bp | 2720033 |
|---|
| End bp | 2721301 |
|---|
| Gene Length | 1269 bp |
|---|
| Protein Length | 422 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | |
|---|
| Product | histidine kinase |
|---|
| Protein accession | YP_003511353 |
|---|
| Protein GI | 291300075 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.880661 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.0603036 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACGACAC CCCACGGACC TCGCCCGGTC TCGGCCTCCG CTGGCCGCCT GGCCGGGCCT
GGTACCGCTC CCGGCGGCGA TCCCGAGCCC CTGGAACACC GCTGGAACCG CATCTGGGCG
CTGCTGCCGT TCGCGTTGCT GGCACCGGCG TCGGTGATAG CCGCCCTCGA CACGACCGGA
TGGATCGCGC GCGGGTTGAT CCTCGCGCTG GCGGTGGCTC TGGCGGGCTG GCACATCTGG
TGGATCCTGT GTAATCCACA GTGGCCAGAA CAGTCGCTGG CACACATGGC GGTGTACTTC
CTCGGCGCGA TAGCACTGCT GGCCGCGCTG CGTTCGCGGG ACGAGGTCTT CGTCATCGCG
GTATCCGGCT TCTTTCCGAT GGCGTTTGTC GCGCTGCCGG GAGCATGGGC CTACCCCGGA
GTGGTGCTGC TGAGTCTGCT GACAGTTCCC GAGGCACCGC GAGGGTTGTG GCAAGGACTG
ACCCTCGGTG ACCTGCTGTT CCCGACGGTG GGGGTGGCGG TGGCGAGTTT CATCGGGGCC
ATGATGCGGA CGGTGGAGCG CGAGGCCATC CGACGCCGCG AGGTCAACGC CCGACTGGTC
GCGCTGGCCG ACGAGAACGC CGCCCTGCAG GCGCGCCTCG TCGAACAGGC CCGCCAGGCC
GGTGTCACGG CCGAACGGGC TCGGCTCGCC CGCGACATGC ACGACACCGT CGCCCAGGGG
CTGGCCGGGA TCGTCACCCA GCTCGAAACC GCCGAGGCCG ATCCCGACGA CACCGCCCGA
CGGTTGCGCA TCGCCCGTGA CCTGGCTCGC GACAGTCTCG TGGAGGTGCG CCGCAGCGTC
GCCGCGCTGC GTCCGGCGCT GCTCGACGAC GCCGATCTCG CCGAGGCGCT GGCTCGCGAG
GTCGACGCGT GGCGGCACCG CAACGACATC GCCGCCACGT TCACGGTCAC CGGGACGCCG
GTCCCGCTCG ACGCGGCGGT GGACGAGGCG GTGCTGCGGG TGGCTCAGGA GGCGCTGTCC
AACACCGCCC GGCACGCGAA GGCGTCCCGG CTCGGCGTCA CACTGTCATA TATGGAGGAC
ATGCTGGTGC TGGACATTCG CGACGACGGC GAGGGATTCG CCGTCGACGC CGAGCCTCGT
CAGGGGTTTG GTCTCACCGC GATGCGGCAG CGGGTGGAGC AGCTCGACGG CAGTGTCCAC
ATCGAGTCGA AGCCCGGTGC GGGTACCGCC GTCAGTGTCA GTCTCCCGCT CGACGGTGAC
GACCAATGA
|
|---|
| Protein sequence | MTTPHGPRPV SASAGRLAGP GTAPGGDPEP LEHRWNRIWA LLPFALLAPA SVIAALDTTG
WIARGLILAL AVALAGWHIW WILCNPQWPE QSLAHMAVYF LGAIALLAAL RSRDEVFVIA
VSGFFPMAFV ALPGAWAYPG VVLLSLLTVP EAPRGLWQGL TLGDLLFPTV GVAVASFIGA
MMRTVEREAI RRREVNARLV ALADENAALQ ARLVEQARQA GVTAERARLA RDMHDTVAQG
LAGIVTQLET AEADPDDTAR RLRIARDLAR DSLVEVRRSV AALRPALLDD ADLAEALARE
VDAWRHRNDI AATFTVTGTP VPLDAAVDEA VLRVAQEALS NTARHAKASR LGVTLSYMED
MLVLDIRDDG EGFAVDAEPR QGFGLTAMRQ RVEQLDGSVH IESKPGAGTA VSVSLPLDGD
DQ
|
|---|
| |