Gene Snas_2569 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_2569 
Symbol 
ID8883764 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp2709015 
End bp2709383 
Gene Length369 bp 
Protein Length122 aa 
Translation table11 
GC content64% 
IMG OID 
Producttranscriptional regulator, GntR family 
Protein accessionYP_003511342 
Protein GI291300064 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.58934 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.172814 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTTGACG ACCGCAGTCC GATCTACCGA CAGATCGCCG AACGGATCAA AGGCGACATA 
CTCTCCGGCG CGCTCGCGGA GGATTCGCAG GTCATGTCGA CCAACGAGTA CGCGGCCACC
TACCGCATCA ATCCGGCCAC CGCCGCGAAG GGGCTGCGGG AACTGCTCGA CGAGGGCATT
CTCTACAAGC GCCGCGGCAT CGGCATGTTC GTCAGCCCTG ACGCCCGCGC GAAGCTGCGC
GAGGCACACC GCTCCCGTTT CTTCACCGAC GTCGTCGACC CGATGATCAG TGAGGCCCGG
ACCATCGGCA TCCCGCTCGA CGACGTGGTC GGGCACATCA AAGCAGCAGA AACCGGTGAG
AACCAATGA
 
Protein sequence
MFDDRSPIYR QIAERIKGDI LSGALAEDSQ VMSTNEYAAT YRINPATAAK GLRELLDEGI 
LYKRRGIGMF VSPDARAKLR EAHRSRFFTD VVDPMISEAR TIGIPLDDVV GHIKAAETGE
NQ