Gene Snas_2553 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_2553 
Symbol 
ID8883748 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp2693375 
End bp2693953 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content71% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003511327 
Protein GI291300049 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000429414 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.155158 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCTGCCA CGACCGCGGT TAACGAACCG GCTCCGGACA CCTTCGTCCG GGCCGTGAAC 
CAGTTGCGCT CGGGGGCGGT TCGCGCCCGC ATCACCATCG CCGAGGCGAC CGCGCCCCGG
CACATCGCGC CCTATTCGTT CGCGCTCAGC GCGGACGTCG ATCCTCCACA AGGGTTCAAG
GCGGAGGGGC GGTTGATCCT GTTGCACGAC CCGGACGGGC ACGACTCCTG GAACGGGACG
CTGCGGCTGG TGACGTACCT GAGTGTCGAT GTGGACCTGG AGATGGCCAA CGATCCGATG
TTGTCGCCGG TGGCGTGGTC GTGGCTGCTG GAGGGTCTGG GCGCCTGCGA CGCCAGGTTC
ACCGCCGCCG GGGGCACGGT CACGTGCACG ACCTCGACCC GGTTCGGGGA TCTGCGGGAT
CCCCGGGACT TCGGGGCCGA TTCGGAGGCG GTGCTGGAGT TGCGGGCGTC GTGGACGCCG
TGCGGGGACG ACCTGGCGGC GCACACGCGG GCCTGGCAGC GGCTGTTGGC GGCGGCGACC
GGGTTGCCGC CGGACGAGCA GGCGCCGTTC AGTTCGTAG
 
Protein sequence
MAATTAVNEP APDTFVRAVN QLRSGAVRAR ITIAEATAPR HIAPYSFALS ADVDPPQGFK 
AEGRLILLHD PDGHDSWNGT LRLVTYLSVD VDLEMANDPM LSPVAWSWLL EGLGACDARF
TAAGGTVTCT TSTRFGDLRD PRDFGADSEA VLELRASWTP CGDDLAAHTR AWQRLLAAAT
GLPPDEQAPF SS