Gene Snas_2552 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_2552 
Symbol 
ID8883747 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp2692657 
End bp2693385 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content69% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003511326 
Protein GI291300048 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00063807 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.16615 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGAAT CCCCGGCCTT CGACCACCTG CTGCACTGTG TGCCCGATGT GGAGGCGACG 
GTCGCGAAGT ACAGCGCCGC CGGTCTTCCC GCCCACGCCA ACGAACCCTT CGAGGGCTTC
CACAACGGCG CCTGGCTGCT GGACGTCCGC TACGTCGAGA TACTGACCAT CGTGGATCGT
GAACTGTTCG CGCCCTCCGC GTTCGGCAAG GCCACCACCG GCTGGATGCC CACGATCGAC
CGGCTGATGG GCGACGGCGG CGGAGCCCTG AACTTCGCCG TCAACGTCAC CGACGTGGAC
GCCACCGCCG AGCGGCTGCG TCGGCAGGGC CACGACGTCG AGGTCACCAC CTTCAGCTTC
GACGGCTCCC CGGTCAGCTT CCGCGAGGCC ATCCTCACCG ACGCTCCACC ATGGGCACCG
TTCTTCATCA CCTACACGCC GTCCCGCGAG GAGATCTGGA CCAAGCTCGC GGCCGACCGC
GTCAACCGCG GCACCCACGA CCTGACCGGC ATCGTCATCG AGACCCCGCG TCCCGACGAG
GCCGCCACCT GGCTCAGCGA ACTGACCGGC GTCCCCCGCG ACGAAGACAC CGCGGCCGTC
CCGCTGCCCG GCGCCACCGT CCATTTCGTC CCCGGCGAGG CCGACCAGAT CACCACACTC
CTGCTGGCCG AAGGGAACCC GCCGACCACC ACCGTCGACG GCCTCGCCCT GCGCCCGGCT
ACGAACTGA
 
Protein sequence
MTESPAFDHL LHCVPDVEAT VAKYSAAGLP AHANEPFEGF HNGAWLLDVR YVEILTIVDR 
ELFAPSAFGK ATTGWMPTID RLMGDGGGAL NFAVNVTDVD ATAERLRRQG HDVEVTTFSF
DGSPVSFREA ILTDAPPWAP FFITYTPSRE EIWTKLAADR VNRGTHDLTG IVIETPRPDE
AATWLSELTG VPRDEDTAAV PLPGATVHFV PGEADQITTL LLAEGNPPTT TVDGLALRPA
TN