| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_2548 |
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| Symbol | |
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| ID | 8883743 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stackebrandtia nassauensis DSM 44728 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013947 |
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| Strand | + |
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| Start bp | 2687420 |
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| End bp | 2689132 |
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| Gene Length | 1713 bp |
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| Protein Length | 570 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | |
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| Product | thiamine pyrophosphate protein TPP binding domain-containing protein |
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| Protein accession | YP_003511322 |
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| Protein GI | 291300044 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.271153 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.122041 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGAAGA TGCCAGTCAT GCAGGCGGTC GTGGAAGTGC TCAAGAGCGA GGGAGTCGAC
ATCGCGTTCG GCTGCCCCGG AGCCGCGATC CTGCCGCTGT ACCACGCGAT GGAACAGAAA
GGAGGGATCA AACACCTCAT CGTCCGGCAC GAGGAGGGCG CCACCCACAT GGCCGACGGC
TGGGCCCGCA CCAACGGCAA GGTCGGCGTC GCCATCGGCA CCTCCGGACC GGCCGGGACC
AACATGATCA CCGGCCTGTA CACCGCGATC GCCGACTCGA TCCCGATGGT GTGCATCACC
GGCCAGGCCC CACTGGCCAA ACTGCACCAG GAGGCGTTCC AGGCGGTCGA CATCGTCGAC
ATCGCCGCCC CGGTGACGAA GTGGGCGGTG CAGGTCAAGG AGGCCGCGCA GGCGCCGTGG
ATCTTCCGGC AGGCGTTCCG CATCGCTCGG TCCGGACGCC CCGGCCCGGT CCTCATCGAC
CTGCCCCTGG ACGTGCAACA GCAGCTCATC GAATGGGACC CGGCGATCGA CTCACCATTG
CCGGTTACCA GCGTCGAGCC GCACCTGCCC CGGGTCGAGA AGGCACTGGA GTTGTTGCTG
GCGGCCGAGA AGCCGCTCAT CCTCGCCGGA GGCGGCGTTA TCACGGCCGA CGCCTCCGAC
GAACTGCTGG CGGTCGCGGA ACTGCTGGAC ATCCCGGTGC AGGTGACCCT GATGGGCAAG
GGCGCGCTGC CCGACGACCA CCGGCTCAAC GCGGGGATGA CCGGCGTCCA GACCACCCAG
CGCTACGCCA ACCAGTCGTT CCTCGAGTCC GATGTGGTGC TGGCGGTCGG GGCCCGGTTC
GGCGACCGCC ACACCGGCGC GCTGGACGTC TACCGGGGCG AACGGAAGTT CATCCACGTC
GACATCGAGC CCACCCAGCT GGGCAAGGTG TTCGGGCCGG ACCTGGGGAT CGTCTCGGAC
GCGAAGATCT TCCTGCGGAC GCTGCGCGAC CTGGCCCGCG CCCGCGACAC GGTGCCGAAA
CGTCCCGACT GGACGGCCCG CATCACGGAG CTGAAGGGCA CACTGGAGCG TCGGCTGGAC
TACGACGCGG TGCCGATCAA ACCGCCGCGC GTGTTCGCCG AGATCAACGC GGCCTTCGGG
CCCGACACGT ACTTCGTGAC CGCTATCGGG CTGTACCAGA TCTGGTCGGG CATGTACCAG
AAGGTCCACA AGCCACGGCA CTACCAGGTG TGTGGCCAGG CCGGGCCGCT CGGTTGGGAG
ATCCCGGCCG CGATCGGTGT CAAGAAGGCC CTGGAGTCGG CCGGACAGTC CGATACTGAG
GTCGTGGGCG TCGTCGGTGA CTACAGCTTC CAGTTCCTGG TCGAGGAGCT CGCCGTCGCG
GCCCAGTACA ACGTCGGGTT CGTGCTCGTC ATGCTCAACA ACGAGTACCT GGGCCTGATC
CGGCAGGCCG AGCTGGAGTA CGAGATGAAC TACGAAGTGG ACATCCACTA CGACGAGTAC
GGCGCCGACA ACGTGGCCAT CATGGAGGCG TACGGCTGCG CGGGGCGCCG CGTGTTCGAG
CCGGGCGACA TCGCCGAGGC GATCACCTGG GCCCGTAAGG AAGCCGCTGC CACCAGCCGT
CCGGTGCTGG TCGAGGTCAT GGTCGAACGC GAAGCCAACT CGGCGCGCGG CAAGGCCATC
GACGCGATCA TCGAACCCGA ACCGATCGGC TGA
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| Protein sequence | MAKMPVMQAV VEVLKSEGVD IAFGCPGAAI LPLYHAMEQK GGIKHLIVRH EEGATHMADG
WARTNGKVGV AIGTSGPAGT NMITGLYTAI ADSIPMVCIT GQAPLAKLHQ EAFQAVDIVD
IAAPVTKWAV QVKEAAQAPW IFRQAFRIAR SGRPGPVLID LPLDVQQQLI EWDPAIDSPL
PVTSVEPHLP RVEKALELLL AAEKPLILAG GGVITADASD ELLAVAELLD IPVQVTLMGK
GALPDDHRLN AGMTGVQTTQ RYANQSFLES DVVLAVGARF GDRHTGALDV YRGERKFIHV
DIEPTQLGKV FGPDLGIVSD AKIFLRTLRD LARARDTVPK RPDWTARITE LKGTLERRLD
YDAVPIKPPR VFAEINAAFG PDTYFVTAIG LYQIWSGMYQ KVHKPRHYQV CGQAGPLGWE
IPAAIGVKKA LESAGQSDTE VVGVVGDYSF QFLVEELAVA AQYNVGFVLV MLNNEYLGLI
RQAELEYEMN YEVDIHYDEY GADNVAIMEA YGCAGRRVFE PGDIAEAITW ARKEAAATSR
PVLVEVMVER EANSARGKAI DAIIEPEPIG
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