| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_2546 |
|---|
| Symbol | |
|---|
| ID | 8883741 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stackebrandtia nassauensis DSM 44728 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013947 |
|---|
| Strand | + |
|---|
| Start bp | 2685646 |
|---|
| End bp | 2686443 |
|---|
| Gene Length | 798 bp |
|---|
| Protein Length | 265 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | |
|---|
| Product | Hydroxypyruvate isomerase |
|---|
| Protein accession | YP_003511320 |
|---|
| Protein GI | 291300042 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0308483 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.0587902 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCGCT TCACCGCCAA CCTGTCCATC CTGTTCACCG AGCTGCCGCT GCTCCAGCGG
CCCGCGGCGG CACGGGCGGC CGGGCTGGAA GCCTGCGAGT TCTGGTGGCC GTTCCCGACC
CCGACACCCT CGGATTCCGA AGTAGACGCG TTCGCCTCGG CCGTCACCGA CGCCGGACTC
CAGCTGACCG GACTGAACTT CGCCGCCGGG GACATGCCGG GCGGCGACCG GGGACTGCTG
TCCTCCCCGT CCGAATCGGC GGCGTTTCGC GACAACATCG ACATCGCGCT CGGCATCGCC
GATCGCCTGG GCTGCAAGGC ACTCAACGCC CTGTACGGCA ACCGCGTCGA CGGCGTCGAC
CCCAATGCTC AGGACGCGCT GGGAGCCGAG AACCTGGCAC TGGCGGCTGC TGCCGCCGCC
AAACAGGACG CGGTGGTGCT CGTCGAAGCC GTCAACTCCA TCGAGAACCC CCGCTACCCG
CTGACGTCCT CGACCGACGT CATCGCGGTC CTGGACCGGG TCGGTTCCGC CAACCTGAAG
TTCCTCGCCG ACTTCTACCA CCTGGCCCGC ATGGGGGAGA ACTTCGACGA GGTGCTGTCC
GTCCACTTCG ACCGGATCGG GCACGTGCAG ATCGCCGACG TCCCCGGCCG GGGTGAACCC
GGCAGCGGAA CCTTCGACTT CGCCGCGCTG TTCGACGACC TCGACGTGCG CGGCTACTCC
GGCCTGGTGG GCCTGGAATA CAAGCCCACC GTGGCCAGTG CCGACAGTCT CGGCTGGATG
GAGAAACACC GGCAGTAA
|
|---|
| Protein sequence | MTRFTANLSI LFTELPLLQR PAAARAAGLE ACEFWWPFPT PTPSDSEVDA FASAVTDAGL
QLTGLNFAAG DMPGGDRGLL SSPSESAAFR DNIDIALGIA DRLGCKALNA LYGNRVDGVD
PNAQDALGAE NLALAAAAAA KQDAVVLVEA VNSIENPRYP LTSSTDVIAV LDRVGSANLK
FLADFYHLAR MGENFDEVLS VHFDRIGHVQ IADVPGRGEP GSGTFDFAAL FDDLDVRGYS
GLVGLEYKPT VASADSLGWM EKHRQ
|
|---|
| |