Gene Snas_2534 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_2534 
Symbol 
ID8883729 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp2673506 
End bp2674087 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content73% 
IMG OID 
Product4-diphosphocytidyl-2C-methyl-D-erythritol synthase 
Protein accessionYP_003511308 
Protein GI291300030 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.243799 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGTCG CGGGCCTGGT GTTGGCCGCC GGAGCTGGAA CCCGGTTCGG GCGGCCGAAG 
GCGCTTGTGG AGTATCGGGG CGCGACACTG CTGGATCGCG CGGTGACGAT CCTGCGCGAG
GGCGGCTGCG AGACGGTGTA CGGCGTGCTG GGCATCAGTG CCTACGCGGC CCGCGCGCGC
TCGGCCACCG CGTTCACCCC GGTGTACAAC CCGCGGTGGC ACACCGGCAT GGGCTCCTCG
CTGCGGGCCG GACTGGCGGC GCTGGATCGC GAGCACGAGG GCGTGGTGGT CCTGCTGGTC
GACCAGCCCG GCATCTCACC GGTGTCGGTT CGCCGGGTCC GGGAGGCCCA CGCGCTGGGC
GCGTTGGTCG CGATGGCCGT CTACAACGGA CGACGGGGTC ACCCCGTGTG TTTCGATCGC
GGGCTGTGGC CGGAGATCGC CGAGGCGGCG CACGACGACG TCGGGGCGCG CGAGTTCCTG
CGCGCTCACC CGGATCTGAT CACCGAGGTG GCGTGTGACG GCCTCGGCGA CCCCCGCGAT
ATCGACACCC CCGCGGATCT GGCGCGACTG CGGCGGCGGT GA
 
Protein sequence
MSVAGLVLAA GAGTRFGRPK ALVEYRGATL LDRAVTILRE GGCETVYGVL GISAYAARAR 
SATAFTPVYN PRWHTGMGSS LRAGLAALDR EHEGVVVLLV DQPGISPVSV RRVREAHALG
ALVAMAVYNG RRGHPVCFDR GLWPEIAEAA HDDVGAREFL RAHPDLITEV ACDGLGDPRD
IDTPADLARL RRR