Gene Snas_2529 details

Gene Information

• Locus tag: Snas_2529
• ID: 8883724
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Stackebrandtia nassauensis DSM 44728
• Kingdom: Bacteria
• Replicon accession: NC_013947
• Strand: +
• Start bp: 2666392
• End bp: 2669916
• Gene Length: 3525 bp
• Protein Length: 1174 aa
• Translation table: 11
• GC content: 66%
• Product: putative signal transduction protein with Nacht domain
• Protein accession: YP_003511303
• Protein GI: 291300025

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 0.250967
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 17
• Fosmid unclonability p-value: 0.208659
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGCCCATCG AGCCCATCCT GAAAGCCATC GGTGCGCCCT GGCCGGTTTA CGTGGTCGTC 
CTGCTGACCG CCGCGGTGCT GACCGCGACC CCACCGGGCC GCCGATTCGT GGAGCGGGTC 
CTCACCTGGT GCGCGGTGAA CATCCGGTTC CGGCTGCGGG CGTTGCGTCG GTACCGGGAC 
GAGGTGCTGC GAGTGGACAG CGAGGTTCCG CTGCCGTTCG TGGCGCACGG CGAGCACCCC 
GTCAAACTGA CCCAGCTCTA CGTTGGACGT TCGGTGGCGG ACCGGTCGAC GCGACCACGG 
GTGAAGCGCT CGGACGAGGA GGCGGCGGAA CCGGAACCTG ATTCCATGGA GCGCAGGCTG 
AGCACCTCCG ACCGCCGCAA GGCCGCGGTC ATCACCGGCG AACCGGGATC GGGCAAGAGC 
TTGCTGTTGC AGGCGTTGGT GTACGGCTGG GCCAACAGGT TCAGCGAGGT CAGCAGCGAG 
CCGATTCCGA TCCGGATCAG CCTTCCCGAT CTGAGGCCCG AGCTGCGGCC CGAGAAACCG 
CATCCGCTGG ACGAGGACGG CGAACTGTAT CCGCTGCGAC AGCTGATCGC GCGGAGCTTC 
CAGCTGCGCG GTGTCTCGCA CGCGATGCGG TTCGTGCTCC ACAGCCTGCG CAGCGGTCGG 
CTGTGGCTGT TGCTCGACGG ACTCGACGAG GTGTCCAAGA CCAATGAGGA CGAGGTGCGT 
CGGCTGCTGG TCCTGGCGCG GGAACGGTAT CCGCGGTGCC GGTTCACGGT GACCTGTCGG 
GAAGCGGTGT ATCGGCAGCG GCTCGCCGGA TACGACACCC TGTCGCTCGG CGGATTTACC 
GAATCCAACA TCGACGAGTT TCTGGAGCGC TGGTCTGAAC GCCCTGACGG GTCGCCTGAG 
CAGGTGCGGC GGTTGAAGGC TGACCTGAAC GCGGGGGTCG ACCGGCTGAA GCAGCTGGCC 
CAGAGCCCGT TGCTGCTGAC ATATATGGCC TATGTGTACG GTCGCACCGA CGTCGATCGT 
CCGTTGCCAG GTTCGCGCGG GAGGTTCTTC GAGGAGGTCG TCGACTTCCT GTTGACGCAC 
AAGGCGGGGG ACGAGTTCAG CGCCGAGTCG AAGTCCTTGG CGTTGCGGCA GCTGGCGCTT 
CGCGCGTTGC GGGCCGAACG GCAGGTGCTC AGTCACGAGC AGGTGATCGC GGAGATCAGG 
GCGACGCTGC CACAGGCGGG CCTGCCCGAG GACGTGGCGA CGTCGCTGTT GCGAGAGATC 
GTCCACCGCA CCGGACTGTT GCGGAAGTTG CACGCCCGCA ACGAGTACCA GTTCGCGCAC 
TTGAATCTGC AGGAGTTCTT CGCGGCGACG ACGTTCGGGG AGCATCCGAC GGAGTTGCTG 
TCGCACTATC GCTCTGATCC GGACACGTGG CGGGAGGTGG TGCGGTTGTG GTGTGGACAG 
GCGTCCGCGA GTGTTCCGTC GATTGTCGAC ATCCTTCAGC AGTCTGACTT CGCGCTGGCA 
CTGGATTGCC TCGCTGAGTC CGATGGGGAC TATATACCCG ACTGGCTGAC CGAGCGAGTC 
ATGCAGACGT TCAGGGTTTT CACACCCGAC GGCCTGGCCC TGCTGCCCAG CGCCCAGGAT 
GAGGGCCGCG TCATGTCGGC GATCTCGTCG CTGGCGGCGG ACTCACGATC ACTCGGTACC 
CGGGTTCGCC AACTCCTCAT GGACGGCAGT GACGGGGATC CGCAACTCAA TGACGCCAGC 
ATGATGCACG TGCTGGCGAT GTCCGGGCAC GAGGACGCGG CCGATCATCT GCTGCGTCGA 
ATGCGGAACG CGTCAAACGA CGAAGGAGGT ATCCAGCCGA TCTGGTTCTT CCGGTTGATG 
GGGGACACCG CGGTCAAAGC ACTGTGGAAC CTCCATACGC CACCATGGAG TCAATCGATG 
AACCCCGGAC CCGTCGCGAG CGACTTCGGG TATCCCGAAA CAGGGTTCGA AGCCGAACTC 
GTCAGCGACA TCGCGTTGAT CGCGTCGCCG CTCGCGTTGC AGCGGCTCAC CGAACTGCTT 
TCCGATCCCC GGTCTGAGGT GTGTGTTACC GCCGCCCTCA AGTTGGCGCA ACTTGTGGCC 
ATGCCGGGAC ACGAGGCGGT GTTGCGGCGG ATCAGTTTTC CCGAACCGAC GGAACTGGAC 
CTGCCGTGGC GGCCCTTCGA GGCCGGGTGT TCGGCGGACT TCGTCCGGCT GATGAATCGC 
ATCGTCGCAA TCCTGGCCGG GTTCCATCCC ACGCGCGCCG ACTATCCGAT CAACCTCGAA 
GACCTGCAGA TTGACAACCG GATCGCCACA TACCTGGTGG CGGAGGCGGC CATGGCGGGA 
ATACAGCGCG TTGAAGCACT GCCGATCGCC AACGCGCTGG AGTACTATCC GGCCGCCACG 
GACACCGACC TTCGGGACAC GGCCGGGGCC GCTGGTCATC GCTCGAACAC GCCGGTGGAG 
AACCTCAGCC CGGACCGCGC GGAGGTTGTA CTCCTGGAAC TCGTGACAGC TTCGGGTGGT 
ATTGACCGCG ATGAGCGAGG CAAGCGGCCG GTGGGAATGG CCGCCTGGTT TCAGGTCCTG 
CGCGACAGCA TCTCCGACAC GGCGCTCGCC GGAGTGCTGT CGATGGCGAA GGGCAGGCCG 
TACCACGATC TCGACGTCGA CTGGGTTCCG GTCACGCGGC TGGAACCCGA CGCGAAACCG 
TCGAGCCCGA TGCGACATCT ACAGTGGGCG TTCATGGCCA CGTTCTCCGT GGCCGCGACG 
GTCGTGTTCC TGACGCTGGC GCCCGCCGAA TCGTGGCATC CACTGTGGTT CCCGATCTTC 
GCGGCGTGCG TGGCGGTGGG CGGCACGGCG AGTCTGGTGA TCCGCAGCGC GACCGCGATC 
GGGGTTGCCG TGGTGTTGCT CGTCGGCGTC GCGGCCATAC CCATGTTGGT GGTGGGCGGT 
GCGCAGCTCG TCGACTGGTT CGGCCGGACA CTCGGACTAC TCGGCGCCAT AGTGGTATTG 
ATTGGTCTCG GGTTCGTCTC GCTCTACCTG CTGGGAGGAC TGTCGGACCG CGCCTATCGG 
CGTTACCCGG GTTTGGCGGC GCTGCCGCTT GCCCCGTGGG CGGGGCTGGT CGTGTATCGG 
CTCTTCGCCG AGGACTGGGG CCCGGCATGG CTTCAGTGGC TCGCCGGGGC CGGAGCGGTC 
ACGTATCTGC TGTACTGCTT CGAAGCGGTG GGCAGAGTGT TGGTGCTATA CCGCAGCTTC 
ATCGGCGCGT TCCTGCCTGT CACGGCACTG TCGTGGATCG GACTCGAGAA CCGGTTCGAT 
GCCCTGCCCG CGACGTTGCT CAGCGTCGGC GGCTACGCTT TCGCGGCGAC CGTCACCATC 
GTCATCGATC GCTACCTGCT GCGGCGTGAG AACCCGCTTC GGGGGACGCT AGCGGAGCTG 
ACGAAGCGCA ACGACGAGAT CAGCCAGCAA CGACAGAGCC GCTTCGGCGA CTGGGCGCAC 
CCCGACGTCC TCGGCAAGTT CAAGCTCCAC TCGCCCATCG CCTGA 

 

Protein sequence

MPIEPILKAI GAPWPVYVVV LLTAAVLTAT PPGRRFVERV LTWCAVNIRF RLRALRRYRD 
EVLRVDSEVP LPFVAHGEHP VKLTQLYVGR SVADRSTRPR VKRSDEEAAE PEPDSMERRL 
STSDRRKAAV ITGEPGSGKS LLLQALVYGW ANRFSEVSSE PIPIRISLPD LRPELRPEKP 
HPLDEDGELY PLRQLIARSF QLRGVSHAMR FVLHSLRSGR LWLLLDGLDE VSKTNEDEVR 
RLLVLARERY PRCRFTVTCR EAVYRQRLAG YDTLSLGGFT ESNIDEFLER WSERPDGSPE 
QVRRLKADLN AGVDRLKQLA QSPLLLTYMA YVYGRTDVDR PLPGSRGRFF EEVVDFLLTH 
KAGDEFSAES KSLALRQLAL RALRAERQVL SHEQVIAEIR ATLPQAGLPE DVATSLLREI 
VHRTGLLRKL HARNEYQFAH LNLQEFFAAT TFGEHPTELL SHYRSDPDTW REVVRLWCGQ 
ASASVPSIVD ILQQSDFALA LDCLAESDGD YIPDWLTERV MQTFRVFTPD GLALLPSAQD 
EGRVMSAISS LAADSRSLGT RVRQLLMDGS DGDPQLNDAS MMHVLAMSGH EDAADHLLRR 
MRNASNDEGG IQPIWFFRLM GDTAVKALWN LHTPPWSQSM NPGPVASDFG YPETGFEAEL 
VSDIALIASP LALQRLTELL SDPRSEVCVT AALKLAQLVA MPGHEAVLRR ISFPEPTELD 
LPWRPFEAGC SADFVRLMNR IVAILAGFHP TRADYPINLE DLQIDNRIAT YLVAEAAMAG 
IQRVEALPIA NALEYYPAAT DTDLRDTAGA AGHRSNTPVE NLSPDRAEVV LLELVTASGG 
IDRDERGKRP VGMAAWFQVL RDSISDTALA GVLSMAKGRP YHDLDVDWVP VTRLEPDAKP 
SSPMRHLQWA FMATFSVAAT VVFLTLAPAE SWHPLWFPIF AACVAVGGTA SLVIRSATAI 
GVAVVLLVGV AAIPMLVVGG AQLVDWFGRT LGLLGAIVVL IGLGFVSLYL LGGLSDRAYR 
RYPGLAALPL APWAGLVVYR LFAEDWGPAW LQWLAGAGAV TYLLYCFEAV GRVLVLYRSF 
IGAFLPVTAL SWIGLENRFD ALPATLLSVG GYAFAATVTI VIDRYLLRRE NPLRGTLAEL 
TKRNDEISQQ RQSRFGDWAH PDVLGKFKLH SPIA