Gene Snas_2467 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_2467 
Symbol 
ID8883662 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp2612910 
End bp2614139 
Gene Length1230 bp 
Protein Length409 aa 
Translation table11 
GC content72% 
IMG OID 
Producthistidine kinase 
Protein accessionYP_003511243 
Protein GI291299965 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.241937 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGTGT TCCGCCCGCT GACCAGCCTG TCCACCTATC GGGGGTGGAT GTGGCTGGTC 
CTGGGCGGCG CCATGCTGAT GCCGTACATG ATGGCCGCCG AAGTCATGCG CATGCTCGTC
ATCGGTGAGT CCGACTTCGG TTCGACGCTC ATCACCGCCC AGCTGCCCGC GTTCGTGGCG
ATGCTGCCGG TCATCGCGGT CACGGCGCTG GTGCTGCCGG TGCGGTTGCT GTCGGCGATC
CCGGCCCGCA GCCTGCTGGG CGTCGCGATC CCGGTGGCCG CCAGCATCCG CGACTGGGAC
CGCCGGGCCC GCGACGCCGC CTGGTTCACC CTCCACCTCG GACTCGGCGG ACTGGTCAGC
GGCATCACGC TGGCCGTGAT CCCGTTCGCG GGCTTCATCA CGGTGCTGCC GCTGGTGTCC
AGCCGTAACG AACTCATCGG CAAGTACTTC ACCGTCCACT GGGAAGCCTG GTGGGGACTG
GTGCTCGGCC CGCTGATGCT GCTGGCCCTG GTGTACCTGG CCTGGTTCAC CACCTGGCTG
GTGCGGTGGC TCGCGCCCCG GCTGCTGGGC GCCACCGCCG CCGAGAAGCT CGCCGAGACC
CGTGCCCGGG CCGCCAACCT GGCCGCCCGC AACCGCATCG CCCGCGAACT GCACGACTCC
GTCGGGCACG CCCTGTCGGT GGTGACGGTG CAGTCGGCGG CGGCCGGACG GGTCATCGAC
TCCAACCCCG AGTTCGCGCG CCGCGCCATG TCATCGATCG AGGAGACCGC CCGCCGCGCT
CTGGAGGAAC TGGACACGGT GCTGGGCATC CTGCGCGAGG ACGGACCCGC CGACACCGAA
CCCGCGCGCG GCCTGGACGC CCTGTCCGCG CTCGTCGCGT CCTCCGGCAT CGACGCGTCG
GTCGAGGTCG ACGCCGATCT GGCCGCGCTG CCGCCGCTGG TGTCCCGCGA GGGCTACCGC
ATCGTCCAGG AGAGCCTCAC CAACGCGCTG CGCTACGGCC CCGACCGCAC CGCCACGGTG
CGGATCACCA CCACCCACAA CGGACTGCGG GTCCGCGTCA CCAACCCGAT CGCGCCCAGC
GCCGCCCCGC CCCGCGAGGG GCGCGGCATC ATCGGCATGC GCGAACGCGT GACCGTGCTG
GGCGGAACGC TGTCGGCCGG GCCCCGCGAC GGTCGATGGG TCGTGACCGC CGAGCTGCCT
ATCGGGCAGG CCGACGCCGC CGCTTCCTGA
 
Protein sequence
MTVFRPLTSL STYRGWMWLV LGGAMLMPYM MAAEVMRMLV IGESDFGSTL ITAQLPAFVA 
MLPVIAVTAL VLPVRLLSAI PARSLLGVAI PVAASIRDWD RRARDAAWFT LHLGLGGLVS
GITLAVIPFA GFITVLPLVS SRNELIGKYF TVHWEAWWGL VLGPLMLLAL VYLAWFTTWL
VRWLAPRLLG ATAAEKLAET RARAANLAAR NRIARELHDS VGHALSVVTV QSAAAGRVID
SNPEFARRAM SSIEETARRA LEELDTVLGI LREDGPADTE PARGLDALSA LVASSGIDAS
VEVDADLAAL PPLVSREGYR IVQESLTNAL RYGPDRTATV RITTTHNGLR VRVTNPIAPS
AAPPREGRGI IGMRERVTVL GGTLSAGPRD GRWVVTAELP IGQADAAAS