| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_2465 |
|---|
| Symbol | |
|---|
| ID | 8883660 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stackebrandtia nassauensis DSM 44728 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013947 |
|---|
| Strand | + |
|---|
| Start bp | 2610403 |
|---|
| End bp | 2612028 |
|---|
| Gene Length | 1626 bp |
|---|
| Protein Length | 541 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | |
|---|
| Product | ABC transporter related protein |
|---|
| Protein accession | YP_003511241 |
|---|
| Protein GI | 291299963 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0270517 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCTCCG TTACCGGACT CGAACTTCGT GCCGGTTCCC GAATCCTGCT GTCCGACATC
AACCTGCGGG TGCAGCCCGG CGACCGTATC GGCCTGGTGG GCCGCAACGG GGCCGGAAAG
ACCACCACCC TGAAGTCGAT GGCGGGCGAG AACCAGCCCT ACGCCGGGTC GATCGATCGC
AAGGGCCCGT TCGGGTACCT GCCGCAGGAC CCCCGCACCG GCGACCTGGA CACCTCGGCG
CGCGACCGGG TGCTGTCCGC GCGGGGCCTG GACGCGATGT TGTCCGAGAT GAACAAGCTG
CAGGCGAAAC TGTCCGAGAC CGCCGACGAC GCCGAACGCG ACAAGCTGGT GCGCCGCTAC
GGCAACCTGG AGGACCGGTT CTCCAGCATG GGCGGCTACG CCGCCGAGTC CGAGGCCGCC
CGGATCTGTT CCAACCTGGG ACTAGAGGAC CGGATCCTGC ACCAGACGCT GGGCACCCTG
TCGGGTGGCC AGCGGCGCCG GGTGGAGCTG GCGCGGATCC TGTTCGCCGA CACCGCCGAC
GGCAACAGCA CGCTGCTCTT GGACGAGCCC ACCAACCACC TGGACGCTGA CTCCATCACC
TGGCTGCGCT CCTACCTGTC GGCGCACAAG GGCGGACTGA TCGTGATCAG CCACGACGCC
GAACTGCTGG AGGCCGTCGT CAACAAGGTC TGGTACCTCG ACGCCAACCG CGCCACCGTC
GACCAGTACA ACCTGGGCTG GAAGGCATAC CTCAAACAGC GCGAGGACGA CGAGCACCGG
CGCCGCCGGG AACGCTCCAA CGCCGAACGC AAGGCCAACG CCCTGTCGGC GCAGGCCGCC
AAGATGGGCG CCAAGGCCAC CAAGGCGGTC GCGGCCAAGA ACATGCAGCG CCGCGCCGAC
AAGCTGATGG CCGACCTGGA GGACGTCCGG GTGGGGGACA AGGTCGCCAA GGTGCGGCTG
CCGCAACCCG CGCCGTGCGG CAAGACGCCG CTGACCGCGA CCGGACTGTC CAAATCCTAC
GGTTCACTGG AGATCTTCGT CGACGTGGAC GTCGCCGTCG ACAAGGGATC GCGAGTGGTG
ATCCTGGGAC TCAACGGCGC CGGCAAGACC ACGCTGCTGC GGATGATGGC CGGGATGCTG
GAACCCGACA CCGGCGCGGT CGAGGCCGGA CACGGCCTGC GGATCGGCTA CTACGCGCAG
GAACACGAGA CCCTGGACGT CGAGCGCACG GTGCTGGAAC TGATGCGCAC CGCCGCCTCC
AAGGCCGGTG GCAACCAGAC CGACACCGAA CTGCGCAAGA TCCTGGGCGC GTTCCTGTTC
TCCGGTGAGG ACGTCGACAA ACCCGCGGGT GTGCTGTCGG GCGGCGAGAA GACCCGGCTG
GCACTGGCCA CCCTGGTCAC CTCGGGCGCC AACGTGCTGC TGCTCGACGA GCCGACCAAC
AACCTCGACC CGGCCAGCCG GGAACAGGTG CTGGACGCGA TCTCCGGCTT CCCCGGCGCC
ATCGTGCTGG TCACCCACGA CCCGGGCGCG GTGCGGGCAC TGCGGCCGGA GCGGGCGATC
CTGCTGCCCG ACGGCGACGA GGACCTGTGG AGCGACGACC TGATGGAACT CGTCGAACTG
GCCTGA
|
|---|
| Protein sequence | MISVTGLELR AGSRILLSDI NLRVQPGDRI GLVGRNGAGK TTTLKSMAGE NQPYAGSIDR
KGPFGYLPQD PRTGDLDTSA RDRVLSARGL DAMLSEMNKL QAKLSETADD AERDKLVRRY
GNLEDRFSSM GGYAAESEAA RICSNLGLED RILHQTLGTL SGGQRRRVEL ARILFADTAD
GNSTLLLDEP TNHLDADSIT WLRSYLSAHK GGLIVISHDA ELLEAVVNKV WYLDANRATV
DQYNLGWKAY LKQREDDEHR RRRERSNAER KANALSAQAA KMGAKATKAV AAKNMQRRAD
KLMADLEDVR VGDKVAKVRL PQPAPCGKTP LTATGLSKSY GSLEIFVDVD VAVDKGSRVV
ILGLNGAGKT TLLRMMAGML EPDTGAVEAG HGLRIGYYAQ EHETLDVERT VLELMRTAAS
KAGGNQTDTE LRKILGAFLF SGEDVDKPAG VLSGGEKTRL ALATLVTSGA NVLLLDEPTN
NLDPASREQV LDAISGFPGA IVLVTHDPGA VRALRPERAI LLPDGDEDLW SDDLMELVEL
A
|
|---|
| |