Gene Snas_2453 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_2453 
Symbol 
ID8883648 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp2600624 
End bp2601766 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content71% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003511229 
Protein GI291299951 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.261619 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.129793 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTGGA CGACAATCGC CGCGAACTGG AACCACGGCT GCGCGGTGGA ATCGCACGCG 
CGACCGGCGG TGGACCCCGG GCTCGCCTTC ACGGTGCTGC GCACCGCCTG CGAGCCGTAC
CTGCGGGGAA TGCGGCACTA CGCGCTGCCC TCGGTGAGTT TCGACGCCGA CGGCGAGCTG
ATATCCGCGC CGGGTGACCG GCTGCCGTCG TCCGGCGATT CCGACCTCGA CGGCTACCGG
GACCGGCTGT CGTCGCGGGC GGCGAACTGG CGGCTGCGGG CCGTCGAGCC GCTGTTCACC
GACTATCGGC TGTGGCACCG GGTCCGCGAG CAACTGACGC CACTGTGGTC GATCGTGGGC
ATGCCCGTCC TGCCGGTGGC CTCCGAGTTG ATCGTCGCCG CCGGTGACGT CGGGTTGTGC
GAATCCGAGG CGTCCCACCT GAACCTGGTG TTCGTGCTGG ACGGACGCGT AACACTGCTG
GACGACGGAA CCGAGCAGGA ACTGTCCGAA GGGGATGTGG TGCGGATTCC GGCGGCGGGA
ACCGCCGCGC TGCGCTCCTC GACGGCGAGT CTGTCGCTGC GGCTGCGGAT CCCCGTCGAC
CGGCGACTGC CCACCGCCGA CGCGGTGAGG CTGATCAGCC GGGTCGTCGC CGCCGAGGCC
GCCGAACTGG ACGAACCGGT GCCCGAACTG TCCTTCCCAC CACCGACAGA CGGCGAGGAA
CTCAAGCTCC CCGCTGAAAC CGTTGCCCCG CAACGACCTC CGCATCGCGC GGACTACCGC
GCCGAGGCCG AACGGCTCAG CCGGGTGTGG TGGGCGGGCC GGGCCAGCGC GGCGGGTCTC
GATCCGGTTC CCGACCCCGC CGAACCACCA CCGCTGCGTC TCGAACAGCG GGTGCGGGCG
CGCGTCCCGG TGCTGGTGCT GCCCGGCGAG GAACCGGACC AGCAACTGTG GGCGGTCAAC
GGTATGGCCT TCAGTGTGGC CGGGCCGACA CCGGGATTGG TGCTGGATCG GTTGCGCGGC
AACGATTCGG TCGAGGTGGC CGAACTGTGC CGGGACGCCG ACGGCCAGGA CAACGGCGCC
GGGCCGCTGC TGGACCGGTT GCGCGAACTG CGTGCCATCG AGATCGTCGA GGAGACACCA
TGA
 
Protein sequence
MTWTTIAANW NHGCAVESHA RPAVDPGLAF TVLRTACEPY LRGMRHYALP SVSFDADGEL 
ISAPGDRLPS SGDSDLDGYR DRLSSRAANW RLRAVEPLFT DYRLWHRVRE QLTPLWSIVG
MPVLPVASEL IVAAGDVGLC ESEASHLNLV FVLDGRVTLL DDGTEQELSE GDVVRIPAAG
TAALRSSTAS LSLRLRIPVD RRLPTADAVR LISRVVAAEA AELDEPVPEL SFPPPTDGEE
LKLPAETVAP QRPPHRADYR AEAERLSRVW WAGRASAAGL DPVPDPAEPP PLRLEQRVRA
RVPVLVLPGE EPDQQLWAVN GMAFSVAGPT PGLVLDRLRG NDSVEVAELC RDADGQDNGA
GPLLDRLREL RAIEIVEETP