| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_2449 |
|---|
| Symbol | |
|---|
| ID | 8883644 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stackebrandtia nassauensis DSM 44728 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013947 |
|---|
| Strand | - |
|---|
| Start bp | 2596207 |
|---|
| End bp | 2597211 |
|---|
| Gene Length | 1005 bp |
|---|
| Protein Length | 334 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | |
|---|
| Product | glycerophosphoryl diester phosphodiesterase |
|---|
| Protein accession | YP_003511225 |
|---|
| Protein GI | 291299947 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.018608 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGAAG ACAGCCTCCC CGCTTCGAAG ACGACCAAAC CCCGGTTCCG GAAACTGAAG
ATCACCGGCA TCGCGCTGCT GCTGTTGGCC GGTTTCGTCT TCGTCAACAA CACGTCCCTG
CTGGCCTTCC CCGGCGGCGA CGCTCCACAG CTGTTGGCGC ACCGCGGCAT GTCGCAGACC
TTCGACATGT CCGGTGTGGA TTCCGACACC TGCACCGCCG AACGCATCAA CGAGCCCCGC
CACGACTACC TCGAGAACAC CATCCGCAGC ATGAAGGCGG CCTTCGACGC CGGGGCCGAC
CAGGTTGAGC TGGACGTCCA GATGACCAAG GACGACCAGT TCGCGGTGTT CCACGACTGG
GAACTGGACT GCCGCACCGA AGCCAGCGGC AAGACCCGCG ACCTCACCAT GGCGCAGCTG
CGGAAGCTCG ACATCGGCTA CGGCTACACC GCCGACGGCG GCAAGACCTT CCCGTTCCGG
GGCAAGGGAG TCGGCATGAT GCCGTCCCTG GACGAGGTGT TCGACGAGTT CGGGTCACAG
GAACTGCTGC TGCACATCAA GAGCGACGAC CCCGCCGAGG GCGAACTGCT CGCGAAACGA
CTGTCCACAC TCAGCGACAA GCGACTGCGT GCCATCACCG TGTACGGGGG CGACAAGCCG
ATCGCGGCGC TGCGGGAGAA GATGCCGAAG CTGCGGGTGA TGTCGAAGGC GCTGATGATG
GAGTGCCTGG GCTGGTACGA GGGGCTCAGC TGGATCGGCA CGGTGCCCGC GTCCTGCCGC
AACACCCAGC TGCACATCCC CGAGAGCTAC GCGCCGTGGC TGTGGGGCTG GCCGCACCGC
TTCGGCGAGC GGATGGCCAG CGTCGGCACC CGGGTGGTGC TGGTGGCCGG GAGCGGAGAG
CACTCGGAGG GATTCGACAG TGCCGAATCC CTCCGTCGCA TACCCGAGGA CTTCACCGGG
ATGGTGTGGA CCAACAGCAT CGAGGTGGTC GCACCCCGGT TGTGA
|
|---|
| Protein sequence | MSEDSLPASK TTKPRFRKLK ITGIALLLLA GFVFVNNTSL LAFPGGDAPQ LLAHRGMSQT
FDMSGVDSDT CTAERINEPR HDYLENTIRS MKAAFDAGAD QVELDVQMTK DDQFAVFHDW
ELDCRTEASG KTRDLTMAQL RKLDIGYGYT ADGGKTFPFR GKGVGMMPSL DEVFDEFGSQ
ELLLHIKSDD PAEGELLAKR LSTLSDKRLR AITVYGGDKP IAALREKMPK LRVMSKALMM
ECLGWYEGLS WIGTVPASCR NTQLHIPESY APWLWGWPHR FGERMASVGT RVVLVAGSGE
HSEGFDSAES LRRIPEDFTG MVWTNSIEVV APRL
|
|---|
| |