Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_2440 |
Symbol | |
ID | 8883635 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | + |
Start bp | 2588476 |
End bp | 2589411 |
Gene Length | 936 bp |
Protein Length | 311 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | |
Product | RarD protein, DMT superfamily transporter |
Protein accession | YP_003511216 |
Protein GI | 291299938 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.659696 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.317252 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCACCC GCACCGACTC CCGCACCACG CCCGCCGCCC CCGGCGACGG CATCGTCTCC CACGCCGCCG GAATGGCCGC AGGCAGCGGC GCCTACGTCC TGTTCGGACT GCTGGCGCTG TACTGGCCGC TGCTGGAACC CGCCGGGGCC CTGGAGATCC TGGCCCACCG GATCGTGTGG TCGCTGCTGT TCGTGGTGGC GCTGCTGGCC GTCACCTCCG GCCGCAAGGC GTTCAAGACC CTGCGCGGCA ACCGAAAAGC GCTGTACTAC CTGGTCGCCG CCGGATGCCT GGTCGGCGCG AACTGGGGCT TCTACATCTG GGCCGTCAAC AACAACCACG TCGTCGAGGC CGCCCTGGGC TACTACATCA ACCCGCTGTT CAGCACGCTG CTGGGCACGC TGCTGCTGCG CGAACGGCTG CACCGCGCCC AGTGGGCCGC CATCGCCATC GCCGGGAGCG GCGTGCTGTG GCTGGCGATC GCGGCGGGCA GCCCGCCCTG GATCGCGCTG GCGCTGGCGG GCACCTTCGG CTGCTACGGC CTGGCCAAGA AACAGGCGAA CCTCCCGGCC ATGGAGTCGC TCGCCGTGGA GACCGCGACG CTCGTCCTGC CCGCGGCGGC GTTCCTGGTG TTCCTGTCCG CGCAGGGCAC CGGACACTTC GGGGCCGACA CCGGCCACAG CCTGCTGCTG GCCTCCAGCG GCCTGGCCAC GGCGGTGCCG CTGCTGCTGT TCGGTTTCGC CGCCACCCGG ATCCCGCTGA CGGCCGTCGG CATGCTCCAG TTCCTCACCC CCACCATCCA GTTCCTCATC GGGGTGTTCG GGATGCACGA GACCGTCGGT GAGGCGGGCC TGGGGCCGTA CGTCCTCGTG TGGATCGCCG TGGCGATGTA CGTGGTGTGC GATGTCCGGA TCCGGCGGCG CGCCGCGGCG GGATAG
|
Protein sequence | MSTRTDSRTT PAAPGDGIVS HAAGMAAGSG AYVLFGLLAL YWPLLEPAGA LEILAHRIVW SLLFVVALLA VTSGRKAFKT LRGNRKALYY LVAAGCLVGA NWGFYIWAVN NNHVVEAALG YYINPLFSTL LGTLLLRERL HRAQWAAIAI AGSGVLWLAI AAGSPPWIAL ALAGTFGCYG LAKKQANLPA MESLAVETAT LVLPAAAFLV FLSAQGTGHF GADTGHSLLL ASSGLATAVP LLLFGFAATR IPLTAVGMLQ FLTPTIQFLI GVFGMHETVG EAGLGPYVLV WIAVAMYVVC DVRIRRRAAA G
|
| |