Gene Snas_2440 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_2440 
Symbol 
ID8883635 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp2588476 
End bp2589411 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content71% 
IMG OID 
ProductRarD protein, DMT superfamily transporter 
Protein accessionYP_003511216 
Protein GI291299938 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.659696 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.317252 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACCC GCACCGACTC CCGCACCACG CCCGCCGCCC CCGGCGACGG CATCGTCTCC 
CACGCCGCCG GAATGGCCGC AGGCAGCGGC GCCTACGTCC TGTTCGGACT GCTGGCGCTG
TACTGGCCGC TGCTGGAACC CGCCGGGGCC CTGGAGATCC TGGCCCACCG GATCGTGTGG
TCGCTGCTGT TCGTGGTGGC GCTGCTGGCC GTCACCTCCG GCCGCAAGGC GTTCAAGACC
CTGCGCGGCA ACCGAAAAGC GCTGTACTAC CTGGTCGCCG CCGGATGCCT GGTCGGCGCG
AACTGGGGCT TCTACATCTG GGCCGTCAAC AACAACCACG TCGTCGAGGC CGCCCTGGGC
TACTACATCA ACCCGCTGTT CAGCACGCTG CTGGGCACGC TGCTGCTGCG CGAACGGCTG
CACCGCGCCC AGTGGGCCGC CATCGCCATC GCCGGGAGCG GCGTGCTGTG GCTGGCGATC
GCGGCGGGCA GCCCGCCCTG GATCGCGCTG GCGCTGGCGG GCACCTTCGG CTGCTACGGC
CTGGCCAAGA AACAGGCGAA CCTCCCGGCC ATGGAGTCGC TCGCCGTGGA GACCGCGACG
CTCGTCCTGC CCGCGGCGGC GTTCCTGGTG TTCCTGTCCG CGCAGGGCAC CGGACACTTC
GGGGCCGACA CCGGCCACAG CCTGCTGCTG GCCTCCAGCG GCCTGGCCAC GGCGGTGCCG
CTGCTGCTGT TCGGTTTCGC CGCCACCCGG ATCCCGCTGA CGGCCGTCGG CATGCTCCAG
TTCCTCACCC CCACCATCCA GTTCCTCATC GGGGTGTTCG GGATGCACGA GACCGTCGGT
GAGGCGGGCC TGGGGCCGTA CGTCCTCGTG TGGATCGCCG TGGCGATGTA CGTGGTGTGC
GATGTCCGGA TCCGGCGGCG CGCCGCGGCG GGATAG
 
Protein sequence
MSTRTDSRTT PAAPGDGIVS HAAGMAAGSG AYVLFGLLAL YWPLLEPAGA LEILAHRIVW 
SLLFVVALLA VTSGRKAFKT LRGNRKALYY LVAAGCLVGA NWGFYIWAVN NNHVVEAALG
YYINPLFSTL LGTLLLRERL HRAQWAAIAI AGSGVLWLAI AAGSPPWIAL ALAGTFGCYG
LAKKQANLPA MESLAVETAT LVLPAAAFLV FLSAQGTGHF GADTGHSLLL ASSGLATAVP
LLLFGFAATR IPLTAVGMLQ FLTPTIQFLI GVFGMHETVG EAGLGPYVLV WIAVAMYVVC
DVRIRRRAAA G