Gene Snas_2412 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_2412 
Symbol 
ID8883607 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp2558773 
End bp2559564 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content70% 
IMG OID 
ProductTPR repeat-containing protein 
Protein accessionYP_003511188 
Protein GI291299910 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.171516 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCACCG GTCCGTCCTG GAACGAGGGC GACCTGGACG GGCTCACCGA ACCGGAGCTG 
GAACGTTTGG GCGGCAAGGC CTGGCGCGAG GGCGACTACG CGCTGGCCGA GCGCGAGTAC
CAGCTGGCCG TGGTCCGGGC CGCCACTCCC GCCGCCAAGG CCCGGGCGCT CAACAACCTC
GGCACCACCT ACGACAGGAT GGGCCACGGC GACAAGGCGC TGGCCAGCTT CACCCGTGCC
GTCGACGTGT ACCGGGCCGT CGGTGAACGG CACGGCGAGG CCGAGGCACT GACCAACCTG
GGGTTGGCGC TGGGAAAGCA GGGCCAGCGC GATCAGGCCA CCACGCATCT GAGCGACGCG
CTGCGGTTGC ACCTCGACAA CGGGGACCGG TTCGGGCAGG CGACGGTTCT GTCCATCATG
GCTGAACTCG ATCGGGCCAA CGGTGACCTG GACGCGGCGC TGGCGACGCA TCGCCAGGCC
CTGGAGATCT ACTGTGAACT GTCGCGGGCC GATGCCGAGT CCACCTGTCT CAACGACTGC
GCGACCACGC TGCTGGCGAT GAACCAGGTT CAGGCCGCGC TGACCGCGTA CGCCAACGCC
CTGGCGCTGG CGCAGCTCGT CGGGGCCGAC GGTGAACGGG CTCGCGCCCA CGACGGCATC
GCCAGAATCC TGTTCTCCCA AGGAGACCGC ACCGGGGCCC GCACCCACTG GTCCTCGGCG
TGGCGGTTGT TCCAGGACAG CGACAAGGAC AGCGCCGAGG CGGTGGCGGT CCGGTTGCGG
CAGTTGAACT GA
 
Protein sequence
MATGPSWNEG DLDGLTEPEL ERLGGKAWRE GDYALAEREY QLAVVRAATP AAKARALNNL 
GTTYDRMGHG DKALASFTRA VDVYRAVGER HGEAEALTNL GLALGKQGQR DQATTHLSDA
LRLHLDNGDR FGQATVLSIM AELDRANGDL DAALATHRQA LEIYCELSRA DAESTCLNDC
ATTLLAMNQV QAALTAYANA LALAQLVGAD GERARAHDGI ARILFSQGDR TGARTHWSSA
WRLFQDSDKD SAEAVAVRLR QLN