Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_2409 |
Symbol | |
ID | 8883604 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | - |
Start bp | 2554752 |
End bp | 2556734 |
Gene Length | 1983 bp |
Protein Length | 660 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | |
Product | glycosyl transferase group 1 |
Protein accession | YP_003511185 |
Protein GI | 291299907 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.360311 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.103606 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGTCCGCG GAAAGCCACA ATCGCTACTG GACGGACGGT GCGGACGCGT GAAGATCACG TTCCTCGTGC ATTCGCTGTA CAGCCTCGGC GGGACGATTC GCACCACCCT CAACACGGCC TCGGCGCTGC TGGACCGTGG CCACGACGTC GAGATCGTGT CGGTGTTCCG GCGCCGCAGC AAACCGCTGT TCCCGCTGGA TCCGCGGTTG ACAGTGCGGA CGCTGGTCGA CGTGCGCACC GACGCCGAGC CGGAGCCGTT GACCGTCTCG GAGGCGACGC TGGCGCAGCG GCCGTCGAAG GTGTTCCCGC CGACCGAGCC GCGCGCGGCC CAGTACCACC GGCTCGCCGA CGCGCGGGTG GCGGTGGCGT TGCGCGACTG CGACGCCGAC GTGATCGTGG GGACCCGTCC GGGGCTCAAC GTCTATCTGG CGAAGTTCGC CCCGACCTCG GCGGTGCGGG TGGGGCAGGA GCATCTGTCG CTCGACCACC ACGGTCGTCG GCTGGCCCGG CGGTTGTACA AGACGTACAA GGCGCTCGAC GCGTTGGTGA CGGTGTCGGC AGCCGACGCC GAGCAGTACC GGCGCGGCAT GCCGAAGGTG GCGGCGAAGG TCGGCCACAT CCCCAACTCG GTGCCGCAAA CGCCGCTGTC GCCCGCCGAC GGGGACACGA AGCTGATCAT CGCGGCCGGA CGGCTGGAGC AGGTGAAGCG CTTCGATGTG CTGCTGCGGG CCTTCGCCCG GATCGTCGGG CGGCACCCGG ACTGGCGGCT GCGGATCTAC GGGCACGGCA AGCAGTCCGC GGAGTTGCGG GAACTGGTGG CCGAGCTGGG TCTCAACGAC AGCGTGATGC TCATGGGGGC GCGCACGCCG CTGGACGCCG AGCTCGTGAA GGGCTCGATA GCGGCGGTCA CGTCCGATTT CGAAGCCTTC GGACTGACCA TAGTAGAGGC CATGAGCTGC GGGCTGCCGG TGGTGGCGAC CGACTGTCCA CACGGGCCCG CCGAGATCAT CGGCAACGGC GCCGACGGCC TGCTCACCCC GGTCGGCGAC GACGCGGCCT TCGCCGCGGC GGTGACCACG CTCATCGAGG ACCCGGAGGC CCGTGGCGCG ATGGCCAAGG CGGCGCTGGA CACCGCCGAA CGCTACCGCC CCGACAGCGT CGCGGCCCGC TACGAGCGAC TGTTCACCGA CCTGGCCAAG GCGAAACGCC GCGCCCTGTC CCCCACCCAC GAGGCGGGGA CTCGCGTGAG CGAGCAGGTC GCCGGATCGT GCCGGGCGGA GTCGTTCGAG CGCGTGGCGC TGCGGCTGCC CGAGGGGGCG GCCAAGCTCA TGCGCCGGGG CAACGCGGTG GAACTGCCCG AGGCGGTCGA CGGCGAGATC ATCGTCGACG CGGCGTTCCT GGCGGGGCTG AGTCAGGGCA TCTGGACGGT GTTCGTGGAC GACGCCAAGC TGGCCGCCGA CCGGATCGAC ACCCGCGTCC TGGTGGACAG CCGCCCGAGC GCGGCCCCGG CCGCGGTGGT GGTGCCGTTC TCCCGCAACG GTGTGCTGGC GCTGCGCGTG TGGCGCTCGC CGGTCTACCC GGAGGTCGAC GCGGTGTCGT GGCACGGCTC CGAGGTGCGG GCCACCGGCG AGCTGGTGGG TCGGCCGTCC GGCGAGCTGA CGGCCGAGGT CGTCTCGCGC GACGCCGAAG CAGCCCGCTA CCCGGCTTCG GTGTCGGTGG ACGCCTCGAC GTTCACGGTG CGCGTGGACG TCACCGACCT GCTCACGGTC AGCGCCGAGG GCACCCGGCT GTGGGACATA CGTCTGCTCG ACGGGCAGCG GGAGCTGCCG GTGGGCAAGG TGCTGGACGA CGTTGCGCAG CGCAAGGGCC CGCACCGGCT CCCGCGCTGG TGGAGCCCGA AACGGCGGCG TGTGCAGCCG TACTTCTCGG TGGACAACCA CCTGTCGCTC AAGATCGACG ACGGCCTGGC CGTCGAGGAG TGA
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Protein sequence | MVRGKPQSLL DGRCGRVKIT FLVHSLYSLG GTIRTTLNTA SALLDRGHDV EIVSVFRRRS KPLFPLDPRL TVRTLVDVRT DAEPEPLTVS EATLAQRPSK VFPPTEPRAA QYHRLADARV AVALRDCDAD VIVGTRPGLN VYLAKFAPTS AVRVGQEHLS LDHHGRRLAR RLYKTYKALD ALVTVSAADA EQYRRGMPKV AAKVGHIPNS VPQTPLSPAD GDTKLIIAAG RLEQVKRFDV LLRAFARIVG RHPDWRLRIY GHGKQSAELR ELVAELGLND SVMLMGARTP LDAELVKGSI AAVTSDFEAF GLTIVEAMSC GLPVVATDCP HGPAEIIGNG ADGLLTPVGD DAAFAAAVTT LIEDPEARGA MAKAALDTAE RYRPDSVAAR YERLFTDLAK AKRRALSPTH EAGTRVSEQV AGSCRAESFE RVALRLPEGA AKLMRRGNAV ELPEAVDGEI IVDAAFLAGL SQGIWTVFVD DAKLAADRID TRVLVDSRPS AAPAAVVVPF SRNGVLALRV WRSPVYPEVD AVSWHGSEVR ATGELVGRPS GELTAEVVSR DAEAARYPAS VSVDASTFTV RVDVTDLLTV SAEGTRLWDI RLLDGQRELP VGKVLDDVAQ RKGPHRLPRW WSPKRRRVQP YFSVDNHLSL KIDDGLAVEE
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