Gene Snas_2407 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_2407 
Symbol 
ID8883602 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp2553066 
End bp2554223 
Gene Length1158 bp 
Protein Length385 aa 
Translation table11 
GC content71% 
IMG OID 
ProductPhosphatidylinositol alpha-mannosyltransferase 
Protein accessionYP_003511183 
Protein GI291299905 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0928502 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAATGA AGATCGGCAT CGTCAGCCCC TACTCCTTCG CCCACCCCGG CGGCGTCCAG 
GGCCATATCC GCGACCTGGC CGAGACCCTC ATCGAGACCG GGCACGAGGT CAGCGTCCTG
GCGCCGGGTG ACCGCGACGA GGAAGTGCCG TCCTATGTGG TGTCGGCCGG TCGTGCCATC
CCGGTGAAGT ACAACGGTTC GGTGGCGCGG CTGTCCTTCG GGCCGCTGGC CGCCACCCGG
GTCCGGCGTT GGTTGCGCCG CAACGACTTC GACGTCCTGC ACGTCCACGA ACCACTGTCG
CCGAGCCTGT CGCTGCTGGC CTGCGTGCTG GCCCGCAGCC CGGTGGTGGC GACGTTCCAC
ACCGCCATGC CCCGGTCGCG GGCGCTGGCG GCCGGACGGG GCATCGCCCA ACTGGTGCTG
GAGAAGATCA CCGCCCGTAT CGCGGTGTCG GCGCACGCCC GCCGCCTCCA GGTCGAACAC
CTCGGCGGCG GCGCCACCGA GATACCCAAC GGCGTCAAGG TGAGCCGGTT CGCCGAGGCA
CCACCGCTGC CGGGCTGGCC CGGCGACGGC GGCTGCCTCG GATTCGTGGG ACGCTTCGAC
GAACCCCGCA AGGGCTTCGC GATCCTGCTG GACGCGTTCG CCGCCCTGGT GCCCGAGCAT
CCCGGGCTGC GGCTGTTGGT CCTGGGACCC GGTGACACCG ACAAGGCCGT CGCCGGGCTC
GACCCGGAGG TACGCGGCCG GATCGACTTC CTCGGGATGG CCTCCGACGA GGTGAAGGCC
CGGATGCTGC GCAGTGTGGA CATCTACGTC GCGCCCAACA CCGGCGGCGA GTCCTTCGGC
ATGATCCTCA CCGAGGCGAT GGCCGCCGGA ACGCCCATCG TGGCCAGTGA CCTCAACGCC
TTCCGTCGCG TGCTCGACGA CGGCGCGGCC GGAGCCCTGT TCCCGGTCGG CGACGCCGAC
GCGCTCGCGG AGACGATCGC GAAGCTGTTG CCCGACAACG AGCTCAAGAA ATCCTATGTG
GCCAAGGCGG ACGAACTGCT GCCCGACTTC GACTGGTCCA ACGTGGCCGA ACGCGTCCTG
GAGGTGTACA CCGCCGCCGT GGAGGCCACC GGCGGAACCG CCGCCCGGGA AACCCCGCCC
GCGCCGGTCC CGCTGTGA
 
Protein sequence
MAMKIGIVSP YSFAHPGGVQ GHIRDLAETL IETGHEVSVL APGDRDEEVP SYVVSAGRAI 
PVKYNGSVAR LSFGPLAATR VRRWLRRNDF DVLHVHEPLS PSLSLLACVL ARSPVVATFH
TAMPRSRALA AGRGIAQLVL EKITARIAVS AHARRLQVEH LGGGATEIPN GVKVSRFAEA
PPLPGWPGDG GCLGFVGRFD EPRKGFAILL DAFAALVPEH PGLRLLVLGP GDTDKAVAGL
DPEVRGRIDF LGMASDEVKA RMLRSVDIYV APNTGGESFG MILTEAMAAG TPIVASDLNA
FRRVLDDGAA GALFPVGDAD ALAETIAKLL PDNELKKSYV AKADELLPDF DWSNVAERVL
EVYTAAVEAT GGTAARETPP APVPL