Gene Snas_2404 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_2404 
Symbol 
ID8883599 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp2549160 
End bp2551316 
Gene Length2157 bp 
Protein Length718 aa 
Translation table11 
GC content69% 
IMG OID 
Productsmall GTP-binding protein 
Protein accessionYP_003511180 
Protein GI291299902 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.136608 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0116105 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCAAA AGAACCGTGA GAGGGGTACC GCCGGTCCCG CACCGGCGGC AACCGAACCC 
GGCAAGGTCC GCAACGTGGC GTTGGTCGGC CACGCCGGAG TGGGAAAGAC AACCCTCGCC
GAGGCGCTGC TGGCCGCGAC CGGGACCATC GAGCGCGCCG GAGACATCAC CGAGGGCACC
ACCGTGTGCG ACCACGACCC CGCCGCCATC GCGCAGCAGC GTTCCGTGGG GGTGGCGTGC
GCGCCGCTGC GTTTCGGCGA CCTGAAGATC AACCTGCTCG ACACCCCCGG GTACCACGAT
TTCGTCGGGG AACTGCGCGC CGGCCTGCGG GCCGCCGACG CGGCACTGTT CGTGGTCTCG
GCGGTCAACG GCCTGGACGC GGCCACCCAG CAGCTGTGGG AGGAGTGCGC GGCGGTCAAC
ATGCCCCGCG CGGTGGCCAT CACCCGGCTG GACCACCCGC AGGCGGACTT CGACGAGACG
CTGGCGCTGT GCCGCCGCAT GTTCGGCGAC GGCGTCCTGC CCGCCTACCT GCCGCTGCAC
GACGACTCCG GTGCCCACGT CACCGGCCTC ATCGGACTGA TCACCCAGCG CGTCTTCGAC
TACTCCGAGG GGCATCCACC GCAGACCCGG GAACCCGACG CCGAGCACGT CACCGCGATC
GCCGAGGCCC GGGGGGAACT CATCGAGGGC GTCATCGCCG AGAGCGAGGA CGAGACCCTC
ATGGACCGCT ATCTGTCCGG TGAGGACATC GACACCGACA CGCTCGTGGA CGACCTGGAG
ACCGCCGTGG CCCGGGGCAG CTTCCACCCG GTGGTACCGG TCAACGCCAC CACCCAGGTC
GGGCTGGACG CGGTGCTGGA ACTCATCAGC GGCGGCTTCC CTGCCCCGGA CGAACACCCG
GCACCGACCG TCACCACCGT GGACGGTGAC CCGGCGGAAC CGCTGACCTG CGACCCGAAC
GGACCACTCG CGGCCGAGGT CATCAAGACC ACAGTAGACT CTTACGTCGG CCGGGTGTCC
CTGGTGCGGG TGTTCTCCGG AACACTGCGT CCCGACACCG CCGTCCACAT CTCCGGACAC
GGCCTCAGCG CGCGCGGCCA CCCCGACCAC GACGCCGACG AACGCGTCAC CCACCTGTAC
TCGCCGCTGG GGGCCGACCT GCGCGAGGTG TCCGAGTGCG CCGCCGGTGA CATCTGCGCC
ATCACCAAGT CCGGCACCGC CGAGACCGGC GACACCATCT CCTCCAAGGC CAATCCACTG
TTGATGGCGC CGTGGAAGAT GCCCGAACCG TTGCTGCCCA TCGCCATCAC GGCACCCACC
AGGGCCGACG AAGACGCGAT GGCCAAGAAC CTGACCCGGC TGGTGGCCGC CGACCCCACA
CTGCGGCTGG AACGCAACTC CGAGACCCAC CAGATCGTGT TGTGGTGCAT GGGCGAGTCG
CACGCCGAGG TGGTGCTGGA CCGGCTGCGC GCGGGCGGCA CCCAGGTGGA CACCGAACCG
GTGCGCATCG CGCTGCGCGA GACCTTCACC GGTACGGCCA AGGGAATGGG ACGGCACGTC
AAACAGTCGG GCGGGCACGG TCAGTACGGC ATCTGCCACA TCTCCGTCGA CCCGCTGACC
CAGGGCGAGA ACTTCGAGTT CGTCAACAAG ATCGTCGGTG GCGTCATCCC GCAGCAGTTC
GTCCAAAGTG TCGAGAAGGG CGTGCGGTCC CAGATGGAGC GCGGCCTGGT CGCCGGTTAC
CCCGTCATCG ACATCCGGGT CACCGTCTAC GACGGCAAGA CCCACTCGGT GGACTCCTCC
GACGCGGCCT TCCAGTCGGC GGGCGCGCTG GCGCTGCGCG ACGCGGCCGA GAACGGCCAG
CTCACCCTGC TCGAACCCAT CGACCACGTC GCCATCACCG TGTCCGACGG CTACGTCGGC
GCGGTCATGA GCGACCTGTC CTCCCGCCGG GGCCGGGTGC TGGGAACCGA GACCGACGAC
CGGGACCGCG CGGTGATCCG CGCCGAGATC CCGGCCTCCG AACTGGTGCG CTACGCCATC
GAACTGCGCG CCATGACGGC GGGCTCGGGC GTGTTCGCCC GCACCTTCAT CAGGTACGAG
CCGATGCCCA AACACCTGGC GGAACAGGTC AAGAAGGAAG CGGCGGAACG AAAGTAG
 
Protein sequence
MSQKNRERGT AGPAPAATEP GKVRNVALVG HAGVGKTTLA EALLAATGTI ERAGDITEGT 
TVCDHDPAAI AQQRSVGVAC APLRFGDLKI NLLDTPGYHD FVGELRAGLR AADAALFVVS
AVNGLDAATQ QLWEECAAVN MPRAVAITRL DHPQADFDET LALCRRMFGD GVLPAYLPLH
DDSGAHVTGL IGLITQRVFD YSEGHPPQTR EPDAEHVTAI AEARGELIEG VIAESEDETL
MDRYLSGEDI DTDTLVDDLE TAVARGSFHP VVPVNATTQV GLDAVLELIS GGFPAPDEHP
APTVTTVDGD PAEPLTCDPN GPLAAEVIKT TVDSYVGRVS LVRVFSGTLR PDTAVHISGH
GLSARGHPDH DADERVTHLY SPLGADLREV SECAAGDICA ITKSGTAETG DTISSKANPL
LMAPWKMPEP LLPIAITAPT RADEDAMAKN LTRLVAADPT LRLERNSETH QIVLWCMGES
HAEVVLDRLR AGGTQVDTEP VRIALRETFT GTAKGMGRHV KQSGGHGQYG ICHISVDPLT
QGENFEFVNK IVGGVIPQQF VQSVEKGVRS QMERGLVAGY PVIDIRVTVY DGKTHSVDSS
DAAFQSAGAL ALRDAAENGQ LTLLEPIDHV AITVSDGYVG AVMSDLSSRR GRVLGTETDD
RDRAVIRAEI PASELVRYAI ELRAMTAGSG VFARTFIRYE PMPKHLAEQV KKEAAERK