Gene Snas_2400 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_2400 
Symbol 
ID8883595 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand+ 
Start bp2546442 
End bp2546993 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content68% 
IMG OID 
Producthistidine triad (HIT) protein 
Protein accessionYP_003511176 
Protein GI291299898 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.533125 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0085284 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGAATGACG ACGGCGCACA ACCCGGTGGT CTTGGCATCC CCGACGGCCT GGAGCGGCTG 
TGGACGCCGC ACCGCATGGC CTACATCAAA GGGGAGGGCA AGCCCACCGG AACCGACGAG 
GACCCCGTGG GTTGCCCGTT CTGCGAGATG CCGAAACTGG GCGACGAGGA GGGACTGATC 
GTGGCGCGCG GTGCGCTGGC GTTCTGCGTC CTGAATCTAT ATCCCTACAA CTCCGGCCAT 
CTCATGGTGT GTCCGTACCG CCACGTCGCC GACTACACCG ACCTGGACGA CGCCGAGGTC 
GCCGAGGTCG GTGCGATGAC GCAGCAGGCG ATGCGGGTGA TCCGCTCCGT CAGCGGAGCC 
CATGGGTTCA ACATCGGCCT GAACCAGGGC CGGGTGGCCG GGGCGGGCAT CGCGGGCCAC 
CTGCACCAGC ACGTGGTGCC CCGGTGGGGC GGCGACGGCA ATTTCATGCC GATCATCGCC 
CGCACCAGGG TGCTGCCGGA ACTGCTGACC GACACCCGGG ACCTGCTCTC GGGCGCCTGG 
GGCTCGGCCT AG
 
Protein sequence
MNDDGAQPGG LGIPDGLERL WTPHRMAYIK GEGKPTGTDE DPVGCPFCEM PKLGDEEGLI 
VARGALAFCV LNLYPYNSGH LMVCPYRHVA DYTDLDDAEV AEVGAMTQQA MRVIRSVSGA 
HGFNIGLNQG RVAGAGIAGH LHQHVVPRWG GDGNFMPIIA RTRVLPELLT DTRDLLSGAW 
GSA