Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_2388 |
Symbol | |
ID | 8883583 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | + |
Start bp | 2531426 |
End bp | 2531872 |
Gene Length | 447 bp |
Protein Length | 148 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | |
Product | transcriptional regulator, HxlR family |
Protein accession | YP_003511165 |
Protein GI | 291299887 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.501837 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.00153924 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCTGGGAA GGCTCTACCC CTCACAGGAA TGCTCGGCCG CCCGCGCGCT GGAACTGGTC GGCGAACGCT GGACCCTGCT CATCCTTCGC GACGCCCTGT TCAAGGACTT CACCCGTTTC TCGCAGTTCC AGCAGAGCCT GTCGATCGCC CCGAACATCC TGACCAAACG TCTCAATGAC CTGGTGGACA ACGGAATCCT GCGAACCCAC ACCGCCGCAG ACCGCTCCGA CCACCACGAA TACCTCCTCA CCGAGATGGG CCAGACACTC AAACCCGTCA TCACCTCCCT CACCGTGTGG GGCGACCGCT GGGTCCGCCC CGGTCCGGCG GTGTTCGTGC ACGAGACCTG CGGCACCGAG GTCTCGCAGC GCTACGACTG CCCGCACTGC GGCGACACGG TCGCCCCCGA AGCCGTCCGC GCGAACCCCC GCCTCACCGC CGACTGA
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Protein sequence | MLGRLYPSQE CSAARALELV GERWTLLILR DALFKDFTRF SQFQQSLSIA PNILTKRLND LVDNGILRTH TAADRSDHHE YLLTEMGQTL KPVITSLTVW GDRWVRPGPA VFVHETCGTE VSQRYDCPHC GDTVAPEAVR ANPRLTAD
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