Gene Snas_2388 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_2388 
Symbol 
ID8883583 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp2531426 
End bp2531872 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content66% 
IMG OID 
Producttranscriptional regulator, HxlR family 
Protein accessionYP_003511165 
Protein GI291299887 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.501837 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.00153924 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCTGGGAA GGCTCTACCC CTCACAGGAA TGCTCGGCCG CCCGCGCGCT GGAACTGGTC 
GGCGAACGCT GGACCCTGCT CATCCTTCGC GACGCCCTGT TCAAGGACTT CACCCGTTTC
TCGCAGTTCC AGCAGAGCCT GTCGATCGCC CCGAACATCC TGACCAAACG TCTCAATGAC
CTGGTGGACA ACGGAATCCT GCGAACCCAC ACCGCCGCAG ACCGCTCCGA CCACCACGAA
TACCTCCTCA CCGAGATGGG CCAGACACTC AAACCCGTCA TCACCTCCCT CACCGTGTGG
GGCGACCGCT GGGTCCGCCC CGGTCCGGCG GTGTTCGTGC ACGAGACCTG CGGCACCGAG
GTCTCGCAGC GCTACGACTG CCCGCACTGC GGCGACACGG TCGCCCCCGA AGCCGTCCGC
GCGAACCCCC GCCTCACCGC CGACTGA
 
Protein sequence
MLGRLYPSQE CSAARALELV GERWTLLILR DALFKDFTRF SQFQQSLSIA PNILTKRLND 
LVDNGILRTH TAADRSDHHE YLLTEMGQTL KPVITSLTVW GDRWVRPGPA VFVHETCGTE
VSQRYDCPHC GDTVAPEAVR ANPRLTAD