Gene Snas_2387 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_2387 
Symbol 
ID8883582 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp2530653 
End bp2531327 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content69% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003511164 
Protein GI291299886 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0765415 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000698885 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCTTTCCC ACGCACCCGA CATCTACGCG CGCATCCGCC ACCGCCTCCT GAACCTGGCC 
ACCACACTGG ACACGTCCCG CCACGAGACC CCCGTCCCCG CCCTCCCGCT GTGGACAGTC
CGCGACACCT ACGCCCACCT GGCGGGCAAC GTCGCCGACT CTCTCACCGG CAACGTCGAC
GAGCAGGGAA CCGCTCCCTG GACCGCGATC CACGTATCCA ACCGCGCCGA CCACACTCTC
GCCGACATCT GCACCGAATG GTCGGGCAAC GCCGAAGCCT TCGACACCGC CATGCGCGCC
GACGCGAAGC TGTGGGGCAA CGCCTTCGAC CTGTGGCACC ACGAGCAGGA CATCCGCGCC
GCCCTCGGCG AACCGGTCGA CCGCGACGAG ACCACCGTCC GCTTCACCAT CGACCTCCTG
GTCCCCGCGA TCGCCGCGCA CTGGCCCGCC GACACACCAT CGGTCCGGGT GGTCGCCGAC
GACCTCGACC AGGACTGGCA ACTGGGCGAC GGCACCCCGG CCACAACGGT CCACACCAAC
GGCTACGACC TCTCCCGCGG CCTGGCGGGC CGCCGCAGTC GCGTCCAACT CGAAACGCTC
GGCTGGCACA ACCCCGCGCC GCACCTGGCG CACATGCCCG CGTTCGACTT CCCCGAGAAA
GACCTGACCG AATAA
 
Protein sequence
MLSHAPDIYA RIRHRLLNLA TTLDTSRHET PVPALPLWTV RDTYAHLAGN VADSLTGNVD 
EQGTAPWTAI HVSNRADHTL ADICTEWSGN AEAFDTAMRA DAKLWGNAFD LWHHEQDIRA
ALGEPVDRDE TTVRFTIDLL VPAIAAHWPA DTPSVRVVAD DLDQDWQLGD GTPATTVHTN
GYDLSRGLAG RRSRVQLETL GWHNPAPHLA HMPAFDFPEK DLTE